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. 2022 May 9;8(5):500–512. doi: 10.1038/s41477-022-01146-6

Extended Data Fig. 5. Expression patterns of monolignol biosynthetic genes in different tissues of A. spinulosa.

Extended Data Fig. 5

(a) The first heat map shows FPKM values of 17 monolignol biosynthetic genes in pith (Pi), sclerenchymatic belt (Sb), xylem (Xy), and phloem (Ph) by RNA-seq analysis and their transcript abundance by qRT-PCR analysis. The second heat map shows FPKM values of 17 monolignol biosynthetic genes in St1 (stem stage 1), So1 (sorus stage 1), Le1 (leaf stage 1) by RNA-seq analysis and their transcript abundance by qRT-PCR analysis. Transcript abundance and FPKM values were normalized using the Z-score method. (b) Heat map shows FPKM values of five CAld5H genes in different tissues of A. spinulosa. Pi1/2/3 (pith stage 1/2/3), SPX1/2/3 (wavy structure stage 1/2/3), So1/2/3 (sorus stage 1/2/3), St1/2/3 (stem stage 1/2/3), Le1/2/3 (leaf stage 1/2/3), Ga (gametophyte). All gene accession numbers are shown in Supplementary Data 3.

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