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. 2022 Feb 24;16(6):1594–1604. doi: 10.1038/s41396-022-01208-9

Table 1.

Genome-wide average nucleotide identities among the strains utilized in this study.

Genome1 Name Genome2 Name ANI1- > 2 ANI2- > 1 AF1- > 2 AF2- > 1
Bacteroides vulgatus ATCC 8482 Bacteroides vulgatus RJ2H1 98.7 98.7 75.6 75.6
Bacteroides vulgatus ATCC 8482 Akkermansia muciniphila YL44 65.5 65.7 1.0 1.9
Akkermansia muciniphila ATCC BAA-835 Akkermansia muciniphila YL44 99.1 99.1 93.4 90.7
Akkermansia muciniphila ATCC BAA-835 Bacteroides vulgatus RJ2H1 65.7 65.7 2.0 1.1

Average nucleotide identity (ANI) and Alignment Fraction (AF) are measuring genetic relatedness. ANI1 and AF1 are calculated with Genome 1 as the reference. ANI2 and AF2 are calculated with Genome 2 as the reference.