Table 5. Protein-Peptide docking using web server HPEPDOCK of MHC-I with crystal structure of HLA*A2 and HLA*B7.
Peptide | Human allele (PDB ID) | Docking score |
---|---|---|
(kcal mol-1) | ||
For MHC-Class I with HLA-A*02 | ||
KIADYNYKL | 6O4Y | −205.89 |
VVVLSFELL | 6O4Y | −157.77 |
TLDSKTQSL | 6O4Y | −150.05 |
GKQGNFKNL | 6O4Y | −178.48 |
For MHC-Class I with HLA-B7 | ||
KIADYNYKL | 3VCL | −171.84 |
VVVLSFELL | 3VCL | −166.31 |
TLDSKTQSL | 3VCL | −136.22 |
GKQGNFKNL | 3VCL | −152.84 |