Table 1.
Human scRNA-seq Data Sets Used in Simulations
| chu | chu_time | darmanis | |
|---|---|---|---|
| Tissue | Embryonic stem cells | Definitive endoderm cell | Brain cell |
| No. of cell types | 7 | 6 | 5 |
| No. of cells | 1018 | 758 | 366 |
| No. of genes | 21,413 | 18,294 | 17,738 |
| % zeros | 47.43% | 51.15% | 80.06% |
| No. of reference cells | 951 | 689 | 332 |
| No. of reference genes | 2522 | 2160 | 2306 |
| Source | Chu et al. (2016) | Chu et al. (2016) | Darmanis et al. (2015) |
| GEO accession code | GSE75748 | GSE75748 | GSE67835 |
GEO, gene expression omnibus; scRNA-seq, single-cell RNA sequencing.