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. 2022 May 23;12:8666. doi: 10.1038/s41598-022-12718-z

Table 3.

GO-Functional Annotation Clusters for L. johnsonii proteins.

Annotation cluster 1 Enrichment Score: 4.78
Category Associated term Gene p Value
UP_KEYWORDS Ribosomal protein 8 8,12E-07
UP_KEYWORDS Ribonucleoprotein 8 9,20E-07
GOTERM_MF_DIRECT GO:0,003,735 ~ structural constituent of ribosome 8 5,56E-06
GOTERM_CC_DIRECT GO:0,005,840 ~ ribosome 7 2,42E-05
GOTERM_BP_DIRECT GO:0,006,412 ~ translation 8 2,29E-04
KEGG_PATHWAY ljo03010: Ribosome 8 8,01E-04
Annotation cluster 2 Enrichment Score: 1.86
Category Associated term Gene p Value
UP_KEYWORDS Gluconeogenesis 3 6,58E-04
GOTERM_BP_DIRECT GO:0,006,096 ~ glycolytic process 4 8,58E-04
KEGG_PATHWAY ljo00010: Glycolysis / Gluconeogenesis 6 9,35E-04
KEGG_PATHWAY ljo01130: Biosynthesis of antibiotics 7 0,00,376
UP_KEYWORDS Glycolysis 3 0,00,382
GOTERM_BP_DIRECT GO:0,006,094 ~ gluconeogenesis 3 0,00,753
KEGG_PATHWAY ljo01110: Biosynthesis of secondary metabolites 7 0,00,883
KEGG_PATHWAY ljo01120: Microbial metabolism in diverse environments 6 0,00,997
KEGG_PATHWAY ljo01200: Carbon metabolism 5 0,0200

The following clusters, resulting from the DAVID-GO Functional Annotation Clustering, represent the secreted proteins of LJO02 cultured in TIL.