Table 1.
Experiment | Enriched Biological Pathway | Upregulated DEG or DAP | Databasea | P value | |
---|---|---|---|---|---|
Upregulated in SG | Upregulated in FG | ||||
Transcriptomic analysis | Glyoxylate Metabolism and Gly Degradation | DLAT, PDHB, PDHX, LIAS, OGDH | none | REACTOME | 0.014 |
Pyruvate Metabolism | DLAT, PDHB, PDHX | none | REACTOME | 0.030 | |
Proteomic analysis | Translocation of GLUT4 to membrane | none | YWHAE, YWHAQ, YWHAZ | REACTOME | 0.016 |
The Tricarboxylic Acid Cycle | SDHA, SDHB | CS | REACTOME | 0.001 | |
Glycolysis | TPI1 | ENO1, PKM | REACTOME | 0.029 | |
Gluconeogenesis | GOT1, TPI1 | ENO1 | REACTOME | 0.046 | |
Biosynthesis of Amino Acid | GOT1, PKM, TPI1 | CS, ENO1, PRPS2 | KEGG | 0.003 | |
Arg and Pro Metabolism | none | AGMAT, CKB, CKM, CKMT1A, GOT1 | KEGG | 0.005 |
Abbreviations: AGMAT Agmatinase, Arg arginine, CKB M Creatine Kinase Brain, Muscle, CS Citrate synthase, DAP Differentially abundant proteins, DEG Differentially expressed genes, DLAT dihydrolipoamide S-acetyltransferase, ENO1 Enolase 1, GLUT4 glucose transporter 4, Gly glycine, GOT1 Glutamic-oxaloacetic transaminase 1, LIAS Lipoic acid synthetase, OGDH oxoglutarate (α-ketoglutarate) dehydrogenase, PDHB pyruvate dehydrogenase (lipoamide) beta, PDHX pyruvate dehydrogenase complex component, PKM Pyruvate Kinase, Pro proline, PRPS2 Phosphoribosyl pyrophosphate synthetase 2, SDHA, B Succinate dehydrogenase complex flavoprotein subunit A, B, TPI1 Triosephosphate isomerase 1, YWHAE, Q, Z Tyrosine 3-monfooxygenase/ tryptophan 5-monooxygenase activation protein epsilon, theta, zeta
aThe reference for the databases used in the study are: KEGG (Kanehisa and Goto, 2000), REACTOME (Lewis et al., 2005)