Table 3.
Genetic diversity of the 12 bp indel within the bovine LOC100847835 promoter region in the four cattle breeds.
| Breeds | Genotypic frequencies | Allelic frequencies | Ho | Ne | PIC | HWE | |||
|---|---|---|---|---|---|---|---|---|---|
| DD | ID | II | D | I | P-value | ||||
| Shandong black cattle (516) | 0.833 | 0.161 | 0.006 | 0.914 | 0.086 | 0.842 | 1.187 | 0.145 | 0.294 |
| Luxi cattle (59) | 0.407 | 0.492 | 0.102 | 0.653 | 0.347 | 0.547 | 1.830 | 0.351 | 0.646 |
| Bohai black cattle (60) | 0.600 | 0.400 | / | 0.800 | 0.200 | 0.680 | 1.471 | 0.269 | 0.500 |
| Mengshan cattle (37) | 0.811 | 0.189 | / | 0.905 | 0.095 | 0.829 | 1.207 | 0.157 | 0.313 |
Numbers in the brackets behind the breed indicate the number of individuals.
Ho, observed heterozygosity; Ne, expected heterozygosity; PIC, polymorphism information content; HWE, Hardy-Weinberg equilibrium.