TABLE 3.
ISR-2 sequence similarity values among V. cholerae and V. mimicus strains
| Straina | Size (bp) | Sequence similarity valuesb
|
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| RC2 | RC25 | RC4 | RC42 | RC44 | RC45 | RC47 | RC48 | RC5 | RC55 | ||
| V. cholerae O1 classical RC2T | 510 | 2/510 | 1/510 | 4/510 | 1/510 | 4/505 | 2/510 | 5/510 | 13/505 | 12/505 | |
| V. cholerae O1 El Tor RC25 | 510 | 99.6 | 1/510 | 4/510 | 1/510 | 4/505 | 2/510 | 5/510 | 13/505 | 12/505 | |
| V. cholerae O139 RC4 | 510 | 99.8 | 99.8 | 3/510 | 0/510 | 3/505 | 1/510 | 4/510 | 12/505 | 11/505 | |
| V. cholerae NO RC42 | 510 | 99.2 | 99.2 | 99.4 | 3/510 | 4/505 | 4/510 | 3/510 | 15/505 | 14/505 | |
| V. cholerae NO RC44 | 510 | 99.8 | 99.8 | 100.0 | 99.4 | 3/505 | 1/510 | 4/510 | 12/505 | 11/505 | |
| V. cholerae O22 RC45 | 509 | 99.2 | 99.2 | 99.4 | 99.2 | 99.4 | 4/505 | 3/505 | 13/509 | 12/509 | |
| V. cholerae NO RC47 | 510 | 99.6 | 99.6 | 99.8 | 99.2 | 99.8 | 99.2 | 5/510 | 11/505 | 10/505 | |
| V. cholerae O31 RC48 | 510 | 99.0 | 99.0 | 99.2 | 99.4 | 99.2 | 99.4 | 99.0 | 14/505 | 13/505 | |
| V. mimicus RC5T | 509 | 97.4 | 97.4 | 97.6 | 97.0 | 97.6 | 97.4 | 97.8 | 97.2 | 3/509 | |
| V. mimicus RC55 | 510 | 97.6 | 97.6 | 97.8 | 97.2 | 97.8 | 97.6 | 98.0 | 97.4 | 99.4 | |
NO, non-O1/non-O139.
See Table 2, footnote a.