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. 2022 Apr 26;13(20):6039–6053. doi: 10.1039/d2sc01588a

Fig. 5. (A) Reaction similarity vs. overall molecular similarity of 38 126 reaction pairs associated with homologs versus evolutionarily distant enzymes. Red corresponds to reaction pairs of homologous enzymes (total = 18 809 pairs). Blue corresponds to reaction pairs of evolutionarily distant enzymes (total = 19 317 pairs). (B) ‘Reaction similarity’ and ‘Overall molecular similarity’ of a pair of reactions was used to discriminate between homologs vs. evolutionarily distant enzymes. (C) The output of the neural network (‘Evolution Score’) is plotted as a function of reaction- and overall molecular-similarity feature values. The decision boundary (at evolution score = 0.5) is shown in red. The model has learned that reaction pairs with high reaction- and overall molecular-similarity scores are likely evolvable.

Fig. 5