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. Author manuscript; available in PMC: 2022 Sep 16.
Published in final edited form as: Nature. 2022 Mar 16;603(7903):907–912. doi: 10.1038/s41586-022-04480-z

Extended Data Fig. 7 |. Levels of BA metabolites detected in the HMP2 cohort.

Extended Data Fig. 7 |

Abundances of identifiable BAs in HMP2 cohort. BA levels were not universally decreased in dysbiotic CD patients, indicating that decreased levels of LCA, 3-oxoLCA, and isoLCA were not due to lower levels of all BAs in these cohorts. Boxplots show median and lower/upper quartiles with outliers outside of boxplot ‘whiskers’ (indicating the inner fences of the data). n=47 for dysbiotic CD, n = 169 for non-dysbiotic CD, n=12 for dysbiotic UC, n=110 for non-dysbiotic UC and n=122 for non-IBD. The percentage of zeros in each condition are added as x-axis tick labels. See Table S6 for full results.