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. 2022 May 26;17:12. doi: 10.1186/s13015-022-00217-9

Table 1.

Dataset Summaries

NCI-PID
Measure Small Medium Large Reactome
Vertices 56 350 9,009 20,458
Hyperedges 36 228 8,456 11,802
Pathways 2 6 213 2,516
Sources 19 138 3,200 8,296
Targets 10 102 2,636 5,066
Self-loops 1 8 40 433
Unreachable self-loops 1 7 14 32
mean max mean max mean max mean max
Tail size 1.8 3 1.9 5 1.9 10 2.4 26
Head size 1.3 3 1.3 4 1.1 5 1.6 28
Forward-reachable set 35 35 192 192 6,169 6,169 4,645 4,645
Backward-traceable set 28 28 49 70 1,198 2,863 4,027 7,021
Doubly-reachable set 27 27 42 60 756 1,836 929 1,725
In-degree 0.8 5 0.8 15 1.0 323 0.9 1,056
Out-degree 1.1 4 1.2 24 1.7 326 1.4 1,167