Gene | Mutation | Designation | Region affected | Frequency (n, %) | Polyphen-2 | SIFT | ACMG | dbSNP | Methodology* | |
---|---|---|---|---|---|---|---|---|---|---|
LDLR |
NM_000527.4: c.817 +1 G>A |
IVS5+1 G>A | Intron 05 | 1 (0.2%) | - | - | Pathogenic | rs879254685 | 1 | |
LDLR |
NM_000527.4: c.828 C>A |
C276X | Exon 06 | 1 (0.2%) | - | - | Likely Pathogenic | rs146651743 | 1 | |
LDLR |
NM_000527.4: c.947 A>G |
N316S | Exon 07 | 1 (0.2%) | Probably damaging (score: 1.000) | Damaging (score: 0.002) | Pathogenic | rs730882094 | 1 | |
LDLR | NM_000527.4: c.1048 C>T | R350X | Exon 07 | 1 (0.2%) | - | - | Pathogenic | - | 1 | |
LDLR | NM_000527.4: c.1054 T>A | C352S | Exon 07 | 1 (0.2%) | Probably damaging (score: 1.000) | Damaging (score: 0) | Pathogenic | rs879254769 | 1 | |
LDLR | NM_000527.4: c.1057 G>A | E353K | Exon 07 | 1 (0.2%) | Benign (score: 0.437) | Tolerated (score= 0.187) | Likely Pathogenic | rs370471092 | 1 | |
LDLR | NM_000527.4: c.1060+2 T>C | IVS7+2 T>C | Intron 07 | 1 (0.2%) | - | - | Pathogenic | rs774069731 | 2 | Novel |
LDLR | NM_000527.4: c.1139 A>C | E380A | Exon 08 | 1 (0.2%) | Benign (score: 0.009) | Tolerated (score= 0.411) | Likely Pathogenic | - | 2 | Novel |
LDLR | NM_000527.4: c.1187-10 G>A | IVS8-10 G>A | Intron 08 | 1 (0.2%) | - | - | Likely Pathogenic | rs765696008 | 2 | |
LDLR | NM_000527.4: c.1195 G>A | A399T | Exon 09 | 1 (0.2%) | Probably damaging (score: 0.993) | Damaging (score: 0.006) | Pathogenic | rs730882099 | 1 | |
LDLR | NM_000527.4: c.1222 G>A | E408K | Exon 09 | 1 (0.2%) | Probably damaging (score: 0.995) | Damaging (score: 0.004) | Pathogenic | rs137943601 | 2 | |
LDLR | NM_000527.4: c.1247 G>T | R416L | Exon 09 | 1 (0.2%) | Benign (score: 0.144) | Damaging (score: 0) | Pathogenic | - | 1 | |
LDLR | NM_000527.4: c.1285 G>T | V429L | Exon 09 | 1 (0.2%) | Benign (score: 0.307) | Damaging (score: 0.016) | Pathogenic | rs28942078 | 2 | |
LDLR | NM_000527.4: c.1384 G>A | V462I | Exon 10 | 1 (0.2%) | Benign (score: 0.005) | Tolerated (score= 0.434) | Uncertain Significance | rs750363970 | 1 | |
LDLR | NM_000527.4: c.1552 A>G | K518E | Exon 10 | 1 (0.2%) | Possibly damaging (score: 0.5166) | Tolerated (score= 1) | Likely Pathogenic | rs879254937 | 1 | |
LDLR | NM_000527.4: c.1597 T>C | W533R | Exon 11 | 1 (0.2%) | Probably damaging (score: 1.000) | Damaging (score: 0) | Pathogenic | rs879254951 | 1 | |
LDLR | NM_000527.4: c.1661 C>T | S554L | Exon 11 | 1 (0.2%) | Possibly damaging (score: 0.685) | Tolerated (score= 0.167) | Uncertain Significance | rs879254976 | 1 | |
LDLR | NM_000527.4: c.1693 G>C | G565R | Exon 11 | 1 (0.2%) | Probably damaging (score: 1.000) | Damaging (score: 0) | Pathogenic | - | 1 | |
LDLR | NM_000527.4: c.1706-1 G>A | IVS12-1 G>A | Intron 11 | 1 (0.2%) | - | - | Pathogenic | rs879254996 | 2 | |
LDLR | NM_000527.4: c.1721 G>A | R574H | Exon 12 | 1 (0.2%) | Probably damaging (score: 1.000) | Damaging (score: 0) | Pathogenic | rs777188764 | 2 | |
LDLR |
c.1726 del [T] |
Y576Fs | Exon 12 | 1 (0.2%) | - | - | Pathogenic | - | 1 | |
LDLR | NM_000527.4: c.1783 C>T | R595W | Exon 12 | 1 (0.2%) | Probably damaging (score: 1.000) | Damaging (score: 0) | Likely Pathogenic | rs373371572 | 1 | |
LDLR | NM_000527.4: c.1851-1862 del [AGTATTTTGGAC] | 597-600delVFWT | Exon 13 | 1 (0.2%) | - | - | Likely Pathogenic | - | 1 | |
LDLR | NM_000527.4: c.1988-1 G>C | IVS14-1 G>C | Intron 13 | 1 (0.2%) | - | - | Pathogenic | rs1555807335 | 1 | |
LDLR | NM_000527.4: c.2096 C>T | P699L | Exon 14 | 1 (0.2%) | Probably damaging (score: 1.000) | Damaging (score: 0.001) | Likely Pathogenic | rs201573863 | 1 | |
LDLR | NM_000527.4: c.2099 A>G | D700G | Exon 14 | 1 (0.2%) | Probably damaging (score: 0.999) | Damaging (score: 0.003) | Likely Pathogenic | rs879255139 | 1 | |
LDLR | NM_000527.4: c.2140 G>T | E714X | Exon 14 | 1 (0.2%) | - | - | Pathogenic | rs869320652 | 2 | |
LDLR | NM_000527.4: c.2215 C>T | Q739X | Exon 15 | 1 (0.2%) | - | - | Likely Pathogenic | rs370018159 | 1 |