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. 1999 Jun;65(6):2418–2428. doi: 10.1128/aem.65.6.2418-2428.1999

TABLE 1.

List of strains investigated in this study, including EMBL and GenBank accession numbers for ITS sequences and taxon labels used in UPGMA and CA

Strain or species Culture collection no. Origin EMBL/GenBank accession no. (ITS; 28S) Taxon label in CA
T. viride (lectotype) 910-263-877c Germany (?), wood
T. hamatum DAOM 167057 Canada, soil ITS, Z48816; 28S, AF127151 Ha
T. viridea Tr 48 = NRRL 5242 United States, lab strain ITS, AJ230669; 28S, AF127145 Na1d
T. viridea Tr 31 United States, lab strain ITS, AJ230669 Na2d
T. viridea Tr 32 Korea, soil ITS, AJ230669 Na3d
T. viridea Tr 50 N.C. ITS, AJ230669 Na4d
T. viridea GJS 90-14 Vietnam ITS, AJ230669 Na5d
T. viridea GJS 91-1 South Africa ITS, AJ230669 Na6d
T. viridea BBA 68646R Germany, compost ITS, AJ230680 Nb1
T. viridea Tr 3 = CBS 433.97 = BBA 70684 Md., Sclerotinia sp. ITS, AJ230668; 28S, AF127153 Nb2d
T. viridea Tr 7 United States, lab strain ITS, AJ230668 Nb3d
T. viridea Tr 13 Md., mutant of Tr 3 ITS, AJ230668 Nb4d
T. viridea Tr 44 Ga., soil ITS, AJ230668 Nb5d
H. vinosa GJS 94-81 New Zealand, Hoheria sp. ITS, AJ230668 Nb6d
T. viridea BBA 68543 Germany, Dieffenbachia sp. ITS, AJ230668 Nb7
T. viridea GJS 91-160 Brazil, soil ITS, AJ230668 Nb8d
T. viridea GJS 90-7 Vietnam ITS, AJ230668 Nb9d
T. viridea GJS 91-162 Brazil, soil ITS, AJ230668 Nb10d
T. viridea GJS 91-24 ? ITS, AJ230668 Nb11d
H. spec. Hy 42 Wash. ITS, X93982 At1
T. atroviride DAOM 165779 N.C. ITS, Z48817; 28S, AF127151 At2
Hypocrea sp. cf. rufa GJS 96-200 Costa Rica ITS, AJ230659 At3d
H. muroiana GJS 97-26 Japan, Quercus sp. with Lentinus edodes ITS, AJ230659 At4d
H. rufa GJS 90-134 Ga., decorticated wood ITS, AJ230659 At5d
H. rufa Hy 5 Ind. ITS, AJ230659 At6d
T. atroviride BBA 68768 Germany, compost ITS, AJ230659 At7
T. atroviride BBA 68600 Germany, compost ITS, AJ230659 At8
T. atroviride BBA 68601 Germany, compost ITS, AJ230659 At9
T. atroviride BBA 70227 Denmark, wet carpet ITS, AJ230659 At10
T. atroviride BBA 70228 Denmark, wet carpet ITS, AJ230659 At11
T. atroviride BBA 65348R Sweden, conifer ITS, AJ230659 At12
T. virideb Tr 8 = WSF 2023 Wis., soil ITS, X93986 Vb1d
T. virideb Tr 2 = ATCC 18652 Colombia, soil ITS, X93978; 28S, AF127150 Vb2d
T. virideb Tr 22 = ATCC 28020 Wash., soil ITS, AJ230678 Vb3d
T. virideb GJS 91-62 Va., Acer wood ITS, AJ230678 Vb4d
T. virideb BBA 70238 Germany, turf ITS, AJ230678 Vb5
H. rufa Hy 70 New Zealand, Fomes sp. ITS, AJ230678 Vb6d
T. virideb GJS 92-14 New Zealand, pine ITS, AJ230678 Vb7d
T. virideb GJS 92-15 Canada, peat ITS, AJ230678 Vb8d
Hypocrea sp. cf. rufa GJS 89-127 N.C., Indet tree ITS, X93980 Vb9d
T. virideb Tr 21 = ATCC 28038 Va., soil ITS, AJ230675 Vb10d
T. virideb GJS 90-95 N.C., decorticated wood
H. vinosa GJS 94-9 Taiwan, bark ITS, AJ230670 Ko1d
H. vinosa GJS 94-10 Taiwan, bark ITS, AJ230671 Ko2d
H. vinosa GJS 94-11 Taiwan, bark ITS, AJ230671 Ko3d
T. koningii ATCC 64262 Hungary ITS, Z79628; 28S, AF127149 Ko4
T. koningii CBS 457.96 = GJS 96-117 The Netherlands, soil ITS, Z79628
T. koningii CBS 458.96 = GJS 96-118 The Netherlands, soil ITS, Z79628 Ko5d
T. koningii CBS 459.96 = GJS 96-120 The Netherlands, soil ITS, Z79628
T. koningii CBS 460.96 = GJS 96-119 The Netherlands, soil ITS, Z79628
T. koningii GJS 89-122 Md., wood ITS, Z79628 Ko6d
H. rufa GJS 97-243 Ga., oak wood ITS, AJ230667 Ko7d
H. rufa GJS 96-47 Puerto Rico, wood ITS, AJ230685 Ko8d
T. atroviride DAOM 165782 N.C. ITS, Z48818 Ko9
T. koningii GJS 90-18 Wis., burned wood
Trichoderma sp. cf. virideb BBA 68432 Russia/Petrograd, wheat ITS, AJ230686 Vd1
Trichoderma sp. cf. virideb BBA 70470 Germany, wet building ITS, AJ230682 Vd2
T. virideb GJS 92-11 New Zealand, pine ITS, AJ230682 Vd3d
Hypocrea sp. cf. rufa GJS 89-142 N.C., decorticated log ITS, X93987 Vd4d
H. rufa GJS 94-118 France, bark ITS, AJ230679 Vd5d
T. virideb Tr 4 Oreg., roots of Douglas fir infected with Phellinus weirii ITS, AJ230682 Vd6d
T. virideb Tr 5 Oreg., see Tr4 ITS, AJ230682 Vd7d
T. virideb Tr 6 Oreg., see Tr4 ITS, AJ230682; 28S, AF127147 Vd8d
T. virideb Tr 26 = ATCC 32630 Sweden, beach wood ITS, AJ230682 Vd9d
Trichoderma sp. cf. virideb BBA 66069R Germany, soil ITS, AJ230681 Vd10d
Trichoderma sp. cf. virideb BBA 65450 Germany, soil ITS, AJ230673 Vd11d
Trichoderma sp. cf. virideb BBA 70471 ? ITS, AJ230682 Vd12
H. vinosa GJS 96-163 Taiwan, wood ITS, AJ230672 Ve1d
H. rufa Hy 9 Fla., wood ITS, AJ230674; 28S, AF127146 Ve2
T. viride GJS 90-20 Wis., wood ITS, AJ230676 Ve3d
H. rufa GJS 90-125 N.C., oak wood ITS, AJ230677 Ve4d
a

All strains are T. viride type II (27) and represent the new species T. asperellum (41). 

b

All strains are T. viride type I (27) and represent true T. viride. 

c

Persoon L0018559 type, Rijksherbarium, Leiden, The Netherlands. 

d

All strains that are included in the CA.