Table 1.

Statistic parameters and contamination results of the individuals analysed. Total is the total number of reads per library; Unique is the number of sequences mapping uniquely to the human reference; Rmdup is the unique sequences without the duplicate; Endogenous (%) is the proportion of human sequences after trimming; genome-wide; we also reported the number of identified SNPs, the mitochondrial, X and Y-chromosome average depth of coverage.

Individuals #	Sample code #	Total	Uniq	Rmdup	Clonality%	Endo%	Coverage	Number of identified SNPs	mtDNA coverage	mtDNA haplogroup	Y-chromosome coverage	Y-chromosome haplogroup	mtDNA contamination (%)	X coverage	X chromosome contamination (%)	Sex determination
Pompei casa del Fabbro individual_A	f_1R	67,481,814	22,071,517	17,340,415	21.43	37.40	0.42	450.751	41.42	HV0a (85.3%)	0.074	A-M13	0,8 (15.3; 0.2)	0.25	0.8–0.6	XY
Pompei casa del Fabbro individual_B	f_11R	156,203,139	42,007	40,123	4.48	0.017	0.0013	/	/	/	/	/	/	/	/	/