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. 2022 May 13;13:811768. doi: 10.3389/fmicb.2022.811768

TABLE 1.

Primers and probes used in the ERA/CRISPR–Cas12 dual system.

Name Sequence (5′-3′) Length
Forward Primer 1 (F1) AAAGAAATCGGACTCGGAGGACAATGGTCAG 31
Forward Primer 2 (F2)* AAGAAATCGGACTCGGAGGACAATGGTCAG 30
Reverse Primer 1 (R1) CATAAGGCGCATCGTACAGAATCAGGATCGAG 32
Reverse Primer 2 (R2)* GTACAGAATCAGGATCGAGGCGGATCATTTGG 32
Forward Primer (F) GACTCACCGTAGTGGGACACTTCACAAGTACCA 33
Reverse Primer (R) GTTCGGGTGGGATCATACGTGGTTTGTTGACTG 33
F-Q /56-FAM/TTATTATT/3BHQ_1/ 8
F-B /56-FAM/TTATTATT/3Biotin/ 8

The oligonucleotide sequences of ERA primers and non-specific single-stranded DNA for the trans-cleavage assay used by the ERA/CRISPR–Cas12a dual system for the detection of M. pneumoniae. F and R were the forward and reverse primers designed for gRNA2. The remainder was primers designed for gRNA1. The final sequences are marked with an asterisk (*). F-Q was used in the fluorescence system and F-B in the dipstick system for trans-cleavage detection.