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. 2022 Apr 29;11(5):881. doi: 10.3390/antiox11050881

Table 5.

Interaction binding energy (S; kcal/mol) and binding accuracy (RMSD; A) of isolated compounds from V. vinifera seeds and co-crystallized ligand within the IL-1β active site (PDB ID: 6Y8M).

Compounds Energy Score (S; kcal/mol) RMSD (Å)
29 −3.1641 1.0862
30 –3.6842 1.0402
32 −3.7588 1.0871
34 −4.3905 1.0397
35 −4.6213 0.8752
6Y8M co-crystallized ligand −4.2536 1.0950
28 −3.9952 1.3281
31 −4.2309 1.1256
33 −4.2061 1.8351
36 −5.2578 2.1526