TABLE 4.
Species of fungi with 18S-rDNA sequences most similar to the EF4-EF3 clones from the wheat rhizospherea
| Clone no. | Fungal taxa with most similar sequence | Fragment size (bp) | Identity | Results of Chimera Checkb | Accession no. |
|---|---|---|---|---|---|
| Ascomycota | |||||
| Euascomycetes | |||||
| UUF146 | Symbiotaphrina kochii | 680c | 0.984 | N | |
| Erysiphales | |||||
| UUF115 | Blumeria graminis | 500 | 0.872 | N | AF096354 |
| Basidiomycota | |||||
| Hymenomycetes | |||||
| Stereales | |||||
| UUF101 | Athelia bombacina | 513 | 0.809 | N | AF096351 |
| Tremellales | |||||
| UUF103 | Bullera crocea | 504 | 0.839 | N | AF096352 |
| UUF136 | Bullera crocea | 510 | 0.864 | N | AF096364 |
| UUF121 | Bullera crocea | 510 | 0.820 | N | AF096358 |
| UUF143 | Bullera crocea | 508 | 0.867 | N | AF096366 |
| UUF120 | Filobasidium floriforme | 509 | 0.837 | N | AF096357 |
| UUF124 | Cryptococcus albidus | 510 | 0.825 | N | AF096360 |
| UUF149 | Sclerotium sp. BSC-97 | 728c | 0.902 | N | |
| Zygomycota | |||||
| Zygomycetes | |||||
| Mucorales | |||||
| UUF112 | Mortierella polycephala | 515 | 0.844 | N | AF096353 |
| UUF116 | Mortierella polycephala | 509 | 0.854 | N | AF096355 |
| UUF119 | Mortierella polycephala | 503 | 0.779 | P | AF096356 |
| UUF123 | Mortierella polycephala | 503 | 0.844 | N | AF096359 |
| UUF125 | Mortierella polycephala | 514 | 0.970 | N | AF096361 |
| UUF127 | Mortierella polycephala | 503 | 0.839 | N | AF096362 |
| UUF128 | Mortierella polycephala | 504 | 0.767 | N | AF096363 |
| UUF142 | Mortierella polycephala | 507 | 0.834 | N | AF096365 |
| UUF144 | Mortierella polycephala | 508 | 0.852 | N | AF096367 |
| UUF147 | Mortierella polycephala | 507 | 0.844 | N | AF096368 |
| UUF150 | Mortierella polycephala | 514 | 0.968 | N | AF096369 |
| Chytridiomycota | |||||
| Chytridiomycetes | |||||
| UUF130 | Spizellomyces acuminatus | 739c | 0.935 | N |
Sequences were compared to those in the RDP database, containing 10,723 entries.
P, possible chimeric sequence; N, not likely a chimeric sequence.
Sequence were determined in one direction only and not submitted to NCBI.