Table 1.
Identification of the GhPRA1 genes. Abbreviations: vacu, vacuole; plas, plasmalemma; golg, Golgi; chlo, chloroplast; ER, endoplasmic; extr, extracellular. The top three most possible subcellular localizations are shown, and the location numbers indicate the possibility of subcellular localizations.
| Gene Name | Gene Locus ID | Chr Location | CDS | Size | MW (kDa) | pI | Subcellular Localization |
|---|---|---|---|---|---|---|---|
| GhPRA1.A1-1A | Gh_A04G105000.1 | A04: 70948155–70951205 | 630 | 209 | 24.19 | 10.58 | vacu: 5, plas: 4, extr: 2 |
| GhPRA1.A1-1D | Gh_D04G143000.1 | D04: 44330508–44333557 | 630 | 209 | 24.20 | 10.44 | vacu: 7, plas: 4, golg: 2, |
| GhPRA1.A1-2A | Gh_A09G173100.1 | A09: 74156483–74159609 | 630 | 209 | 24.17 | 10.58 | vacu: 12, plas: 1, golg: 1 |
| GhPRA1.A1-2D | Gh_D09G164300.1 | D09: 43855015–43858151 | 630 | 209 | 24.23 | 10.48 | vacu: 11, plas: 2, golg: 1 |
| GhPRA1.A1-3A | Gh_A13G095600.1 | A13: 40978102–40979417 | 630 | 209 | 23.98 | 10.41 | vacu: 6, plas: 4, golg: 2 |
| GhPRA1.A1-3D | Gh_D13G107200.1 | D13: 24914233–24915541 | 630 | 209 | 24.11 | 10.45 | plas: 5, vacu: 5, golg: 2 |
| GhPRA1.B1-1A | Gh_A06G188100.1 | A06: 117938223–117938879 | 657 | 218 | 23.31 | 9.44 | chlo: 5, ER: 4, plas: 3 |
| GhPRA1.B1-1D | Gh_D06G190300.1 | D06: 58492262–58492918 | 657 | 218 | 23.40 | 9.64 | chlo: 7, ER: 3, plas: 2 |
| GhPRA1.B1-2A | Gh_A10G248000.1 | A10: 114198294–114199248 | 648 | 215 | 23.49 | 9.64 | chlo: 6, ER: 3, plas: 2 |
| GhPRA1.B1-2D | Gh_D10G280100.1 | D10: 65324234–65325180 | 648 | 215 | 23.54 | 9.83 | chlo: 6, ER: 3, plas: 2 |
| GhPRA1.B4-1A | Gh_A01G258000.1 | A01: 115880792–115881439 | 648 | 215 | 23.32 | 7.82 | E.R.: 5, plas: 3, chlo: 2 |
| GhPRA1.B4-1D | Gh_D01G252300.1 | D01: 64514473–64515120 | 648 | 215 | 23.33 | 7.82 | E.R.: 4, plas: 3, chlo: 2, |
| GhPRA1.B4-2A | Gh_A08G230400.1 | A08: 119818691–119819320 | 630 | 209 | 22.74 | 8.68 | vacu: 7, ER: 3, plas: 2 |
| GhPRA1.B4-2D | Gh_D08G223400.1 | D08: 63336820–63337449 | 630 | 209 | 22.81 | 8.68 | vacu: 7, ER: 3, plas: 2 |
| GhPRA1.B4-3A | Gh_A09G187600.1 | A09: 75447349–75447999 | 651 | 216 | 23.70 | 9.03 | chlo: 5, plas: 5, golg: 2 |
| GhPRA1.B4-3D | Gh_D09G179300.1 | D09: 45181994–45182644 | 651 | 216 | 23.64 | 8.97 | chlo: 5, plas: 4, vacu: 2 |
| GhPRA1.B4-4A | Gh_A11G031900.1 | A11: 2693360–2694010 | 651 | 216 | 23.69 | 6.73 | vacu: 10, plas: 3, extr: 1 |
| GhPRA1.B4-4D | Gh_D11G032300.1 | D11: 2630603–2631253 | 651 | 216 | 23.69 | 6.10 | vacu: 12, plas: 1, extr: 1 |
| GhPRA1.C-1A | Gh_A08G281100.1 | A08: 124823067–124823489 | 423 | 140 | 16.10 | 6.71 | plas: 4.5, vacu: 3 |
| GhPRA1.C-1D | Gh_D08G271500.1 | D08: 67997394–67997933 | 540 | 179 | 20.29 | 6.06 | vacu: 9, golg: 3, plas: 1 |
| GhPRA1.C-2A | Gh_A13G220200.1 | A13: 104371813–104372518 | 606 | 201 | 22.70 | 5.11 | vacu: 11, plas: 1, extr: 1 |
| GhPRA1.C-2D | Gh_D13G223400.1 | D13: 59483095–59483754 | 591 | 196 | 22.08 | 8.05 | vacu: 7, plas: 2.5, golg: 2 |
| GhPRA1.D-2A | Gh_A09G247600.1 | A09: 81208181–81208732 | 552 | 183 | 20.15 | 4.71 | plas: 8, ER: 2, chlo: 1 |
| GhPRA1.D-2D | Gh_D09G238600.1 | D09: 50472807–50473358 | 552 | 183 | 20.20 | 4.59 | plas: 8, ER: 3, chlo: 1 |
| GhPRA1.E-1A | Gh_A11G135200.1 | A11: 14400779–14401303 | 525 | 174 | 19.28 | 7.95 | plas: 8, chlo: 3, ER: 3 |
| GhPRA1.E-1D | Gh_D11G136100.1 | D11: 12800664–12800954 | 291 | 96 | 11.19 | 10.84 | chlo: 7, plas: 6, ER: 1 |
| GhPRA1.E-2A | Gh_A07G234800.1 | A07: 93082823–93083368 | 546 | 181 | 20.04 | 9.68 | chlo: 7, plas: 6, ER: 1 |
| GhPRA1.E-2D | Gh_D07G232500.1 | D07: 55224484–55225535 | 546 | 181 | 20.17 | 9.68 | chlo: 7, plas: 6, ER: 1 |
| GhPRA1.F2-1A | Gh_A02G142200.1 | A02: 80712703–80713260 | 558 | 185 | 20.72 | 9.09 | plas: 10, golg: 2, vacu: 1 |
| GhPRA1.F2-1D | Gh_D03G062200.1 | D03: 10655558–10656115 | 558 | 185 | 20.76 | 8.07 | plas: 4, vacu: 3, ER: 3 |
| GhPRA1.F2-2A | Gh_A10G049300.1 | A10: 6090256–6090804 | 549 | 182 | 20.53 | 9.09 | plas: 5, golg: 3, chlo: 2 |
| GhPRA1.F2-2D | Gh_D10G062400.1 | D10: 6067187–6067735 | 549 | 182 | 20.47 | 7.93 | plas: 7, golg: 3, vacu: 2 |
| GhPRA1.F2-3D | Gh_D11G280400.1 | D11: 57861036–57861632 | 597 | 198 | 21.96 | 8.82 | plas: 7, ER: 3, chlo: 1 |
| GhPRA1.G2-1A | Gh_A08G031500.1 | A08: 3124048–3125076 | 801 | 266 | 28.99 | 8.76 | plas: 7, nucl: 2, vacu: 2 |
| GhPRA1.G2-1D | Gh_D08G031300.1 | D08: 2941239–2941814 | 576 | 191 | 20.78 | 7.09 | plas: 4.5, vacu: 3, ER: 3 |
| GhPRA1.H-1A | Gh_A04G042500.1 | A04: 7308990–7310582 | 717 | 238 | 26.79 | 9.14 | vacu: 8, plas: 2, extr: 2 |
| GhPRA1.H-1D | Gh_D05G353900.1 | D05: 56125424–56126730 | 717 | 238 | 26.84 | 9.30 | vacu: 9, plas: 2, extr: 1 |