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. 2022 Apr 26;13(5):766. doi: 10.3390/genes13050766

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© 2022 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

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Species tree for Laurasiatheria based on retrotransposon presence/absence data. The tree on the left is the most parsimonious tree with Dollo parsimony (261 and 360 steps for 367- and 470-marker datasets, respectively) and was obtained with the Dollop program in Phylip. The tree on the right was obtained with the coalescence method ASTRAL_BP. Numbers on the left are bootstrap support values; numbers on the right are local posterior probabilities. Dual bootstraps on the left show results for the new 367 TE dataset and the 470 TE dataset after adding non-overlapping data from Doronina et al. [36]. The branch lengths for the ASTRAL_BP tree, in coalescent units, are indicated by the scale bar.