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. 2022 May 27;12:8966. doi: 10.1038/s41598-022-13057-9

Table 2.

List of GenBank accession numbers of Lasiodiplodia species and the outgroup (Botryosphearia dothidea) used in the phylogenetic analysis.

Species Isolate Host Location GenBank accession number References
ITS tef1-α tub2 rpb2
Lasiodiplodia brasiliensis CBS123095 Theobroma cacao Cameroon MT587423 MT592135 MT592615 MT592309 Zhang et al.75
L. brasiliensis CBS115447 Psychotria tutcheri Hong Kong MT587422 MT592134 MT592614 MT592308 Zhang et al. 75
L. brasiliensis CMM4015a Mangifera indica Brazil JX464063 JX464049 MT592614 MT592308 Marques et al.76
L. brasiliensis CSM11 Theobroma cacao Venezuela MF436018 MF436006 MF435998 MT592308 Mohali-Castillo and Stewart19
Lasiodiplodia citricola CBS124707a Citrus sp. Iran GU945354 GU945340 KU887505 KU696351 Cruywagen et al.52; Abdollahzadeh et al.55
L. citricola CBS124706 Citrus sp. Iran GU945353 GU945339 KU887504 KU696350 Cruywagen et al.52; Abdollahzadeh et al.55
Lasiodiplodia crassispora CBS118741a Santalum album Australia DQ103550 DQ103557 KU887506 KU696353 Cruywagen et al.52
L. crassispora CBS125626 Vitis vinifera South Africa MT587424 DQ103557 MT592617 MT592312 Zhang et al.75
L. crassispora CMW33262 Adansonia sp. Unknown KU887068 DQ103557 KU887426 KU887364 Cruywagen et al.52
Lasiodiplodia euphorbiicola CMM3609a Jatropha curcas Brazil KF234543 KF226689 KF254926 KU887367 Machado et al.77
L. euphorbiicola CMM3651 Jatropha curcas Brazil KF234553 KF226711 KF254937 KU887367 Machado et al.77
L. euphorbiicola CMW33268 Adansonia sp. Unknown KU887131 KU887008 KU887430 KU887367 Cruywagen et al.52
Lasiodiplodia hormozganensis CBS124709a Olea sp. Iran GU945355 GU945343 KU887515 KU696361 Cruywagen et al.52; Abdollahzadeh et al.55
L. hormozganensis CBS124708 Mangifera indica Iran GU945356 GU945344 KU887514 KU696360 Cruywagen et al.52; Abdollahzadeh et al.55
Lasiodiplodia iraniensis CBS124710a Salvadora persica Iran GU945348 GU945336 KU887516 KU696363 Cruywagen et al.52; Abdollahzadeh et al.55
L. iraniensis CBS124711 Juglans sp. Iran GU945347 GU945335 KU887517 KU696362 Cruywagen et al.52; Abdollahzadeh et al.55
L. iraniensis CMW35881 Adansonia sp. Unknown KU887092 KU886970 KU887464 KU887388 Cruywagen et al.52
Lasiodiplodia lignicola CBS134112a Dead wood Thailand JX646797 KU887003 JX646845 KU696364 Cruywagen et al.52; Liu et al.78
L. lignicola MFLUCC110656 Dead wood Thailand JX646798 KU887003 JX646846 KU696364 Cruywagen et al.52; Liu et al.78
Lasiodiplodia mahajangana CBS124925a Terminalia catappa Madagascar FJ900595 FJ900641 KU887518 KU696365 Cruywagen et al.52; Begoude et al.79
L. mahajangana CBS124926 Terminalia catappa Madagascar FJ900596 FJ900642 KU887519 KU696366 Cruywagen et al.52; Begoude et al.79
Lasiodiplodia margaritacea CBS122519a Adansonia gibbosa Australia EU144050 EU144065 KU887520 KU696367 Cruywagen et al.52
L. margaritacea CBS138289 Combretum elaeagnoides Namibia KP872320 KP872349 KP872379 KP872429 Zhang et al.75
L. margaritacea CBS138290 Combretum collinum Zambia KP872321 KP872350 KP872380 KP872430 Zhang et al.75
Lasiodiplodia mediterranea CBS137783a Quercus ilex Italy KJ638312 KJ638331 KU887521 KU696368 Cruywagen et al.52; Linaldeddu et al.80
L. mediterranea CBS137784 Vitis vinifera Italy KJ638311 KJ638330 KU887522 KU696369 Cruywagen et al.52; Linaldeddu et al.80
Lasiodiplodia pseudotheobromae CBS116459a Gmelina arborea Costa Rica EF622077 EF622057 EU673111 KU696376 Alves et al.30; Phillips et al.81
L. pseudotheobromae CBS116460 Acacia mangium Costa Rica MT587433 MT592145 KU198428 MT592322 Zhang et al.75
L. pseudotheobromae CBS130991 Mangifera indica Egypt MT587433 MT592145 MT592629 MT592325 Zhang et al.75
L. pseudotheobromae I46 Theobroma cacao Puerto Rico MK693211 MK693707 MK693702 KU696376 Serrato-Diaz et al.17
Lasiodiplodia theobromae CBS164.69a Fruit on coral reef coast Indonesia: New Guinea AY640255 AY640258 EU673110 KU696383 Cruywagen et al.52
L. theobromae CBS214.50 Cajanus cajan India MT587440 MT592152 MT592637 MT592333 Zhang et al.75
L. theobromae CMW13490 Eucalyptus urophylla Venezuela: Acarigua KY473071 KY473019 KY472962 KY472888 Mehl et al.82
L. theobromae CMM4019 Mangifera indica Brazil JX464096 JX464026 EU673110 KU696383 Marques et al.76
L. theobromae CSM57 Theobroma cacao Venezuela MF436029 MF436017 MF435999 KU696383 Mohali-Castillo and Stewart19
L. theobromae M400 Theobroma cacao USA: Puerto Rico MN446021 MN536705 MN536694 KU696383 Puig et al.25
L. theobromae NS2F Theobroma cacao Malaysia: Negeri Sembilan OL831055 OL863319 OL863262 OL863376 This study
L. theobromae M3F Theobroma cacao Malaysia: Melaka OL831056 OL863320 OL863263 OL863377 This study
L. theobromae M4F Theobroma cacao Malaysia: Melaka OL831057 OL863321 OL863264 OL863378 This study
L. theobromae NS7F Theobroma cacao Malaysia: Negeri Sembilan OL831058 OL863322 OL863265 OL863379 This study
L. theobromae NS8F Theobroma cacao Malaysia: Negeri Sembilan OL831059 OL863323 OL863266 OL863380 This study
L. theobromae PP9F Theobroma cacao Malaysia: Pulau Pinang OL831060 OL863324 OL863267 OL863381 This study
L. theobromae PP11F Theobroma cacao Malaysia: Pulau Pinang OL831061 OL863325 OL863268 OL863382 This study
L. theobromae J13F Theobroma cacao Malaysia: Johor OL831062 OL863326 OL863269 OL863383 This study
L. theobromae J15F Theobroma cacao Malaysia: Johor OL831063 OL863327 OL863270 OL863384 This study
L. theobromae J16F Theobroma cacao Malaysia: Johor OL831064 OL863328 OL863271 OL863385 This study
L. theobromae M19F Theobroma cacao Malaysia: Melaka OL831065 OL863329 OL863272 OL863386 This study
L. theobromae PE20F Theobroma cacao Malaysia: Perak OL831066 OL863330 OL863273 OL863387 This study
L. theobromae PE22F Theobroma cacao Malaysia: Perak OL831067 OL863331 OL863274 OL863388 This study
L. theobromae PP23F Theobroma cacao Malaysia: Pulau Pinang OL831068 OL863332 OL863275 OL863389 This study
L. theobromae K25F Theobroma cacao Malaysia: Kedah OL831069 OL863333 OL863276 OL863390 This study
L. theobromae K27F Theobroma cacao Malaysia: Kedah OL831070 OL863334 OL863277 OL863391 This study
L. theobromae S30F Theobroma cacao Malaysia: Selangor OL831071 OL863335 OL863278 OL863392 This study
L. theobromae PE31F Theobroma cacao Malaysia: Perak OL831072 OL863336 OL863279 OL863393 This study
L. theobromae PE32F Theobroma cacao Malaysia: Perak OL831073 OL863337 OL863280 OL863394 This study
L. theobromae S34F Theobroma cacao Malaysia: Selangor OL831074 OL863338 OL863281 OL863395 This study
L. theobromae S35F Theobroma cacao Malaysia: Selangor OL831075 OL863339 OL863282 OL863396 This study
L. theobromae PR36F Theobroma cacao Malaysia: Perlis OL831076 OL863340 OL863283 OL863397 This study
L. theobromae PR37F Theobroma cacao Malaysia: Perlis OL831077 OL863341 OL863284 OL863398 This study
L. theobromae PE39F Theobroma cacao Malaysia: Perak OL831078 OL863342 OL863285 OL863399 This study
L. theobromae K41L Theobroma cacao Malaysia: Kedah OL831081 OL863343 OL863286 OL863400 This study
L. theobromae K42L Theobroma cacao Malaysia: Kedah OL831082 OL863344 OL863287 OL863401 This study
L. theobromae PR43L Theobroma cacao Malaysia: Perlis OL831083 OL863345 OL863288 OL863402 This study
L. theobromae PR44L Theobroma cacao Malaysia: Perlis OL831084 OL863346 OL863289 OL863403 This study
L. theobromae PE45L Theobroma cacao Malaysia: Perak OL831085 OL863347 OL863290 OL863404 This study
L. theobromae PE46L Theobroma cacao Malaysia: Perak OL831086 OL863348 OL863291 OL863405 This study
L. theobromae S47L Theobroma cacao Malaysia: Selangor OL831087 OL863349 OL863292 OL863406 This study
L. theobromae S48L Theobroma cacao Malaysia: Selangor OL831088 OL863350 OL863293 OL863407 This study
L. theobromae S49L Theobroma cacao Malaysia: Selangor OL831089 OL863351 OL863294 OL863408 This study
L. theobromae M50L Theobroma cacao Malaysia: Melaka OL831090 OL863352 OL863295 OL863409 This study
L. theobromae M51L Theobroma cacao Malaysia: Melaka OL831091 OL863353 OL863296 OL863410 This study
L. theobromae NS52L Theobroma cacao Malaysia: Negeri Sembilan OL831080 OL863354 OL863297 OL863411 This study
L. theobromae NS53L Theobroma cacao Malaysia: Negeri Sembilan OL831079 OL863355 OL863298 OL863412 This study
L. theobromae J54S Theobroma cacao Malaysia: Johor OL831092 OL863356 OL863299 OL863413 This study
L. theobromae J55S Theobroma cacao Malaysia: Johor OL831093 OL863357 OL863300 OL863414 This study
L. theobromae J56S Theobroma cacao Malaysia: Johor OL831094 OL863358 OL863301 OL863415 This study
L. theobromae J57S Theobroma cacao Malaysia: Johor OL831095 OL863359 OL863302 OL863416 This study
L. theobromae J58S Theobroma cacao Malaysia: Johor OL831096 OL863360 OL863303 OL863417 This study
L. theobromae J59S Theobroma cacao Malaysia: Johor OL831097 OL863361 OL863304 OL863418 This study
L. theobromae NS60S Theobroma cacao Malaysia: Negeri Sembilan OL831098 OL863362 OL863305 OL863419 This study
L. theobromae NS61S Theobroma cacao Malaysia: Negeri Sembilan OL831099 OL863363 OL863306 OL863420 This study
L. theobromae NS62S Theobroma cacao Malaysia: Negeri Sembilan OL831100 OL863364 OL863307 OL863421 This study
L. theobromae M63S Theobroma cacao Malaysia: Melaka OL831101 OL863365 OL863308 OL863422 This study
L. theobromae M64S Theobroma cacao Malaysia: Melaka OL831102 OL863366 OL863309 OL863423 This study
L. theobromae S65S Theobroma cacao Malaysia: Selangor OL831103 OL863367 OL863310 OL863424 This study
L. theobromae S66S Theobroma cacao Malaysia: Selangor OL831104 OL863368 OL863311 OL863425 This study
L. theobromae PE67S Theobroma cacao Malaysia: Perak OL831105 OL863369 OL863312 OL863426 This study
L. theobromae PE68S Theobroma cacao Malaysia: Perak OL831106 OL863370 OL863313 OL863427 This study
L. theobromae PP69S Theobroma cacao Malaysia: Pulau Pinang OL831107 OL863371 OL863314 OL863428 This study
L. theobromae PP70S Theobroma cacao Malaysia: Pulau Pinang OL831108 OL863372 OL863315 OL863429 This study
L. theobromae PP71S Theobroma cacao Malaysia: Pulau Pinang OL831109 OL863373 OL863316 OL863430 This study
L. theobromae J72S Theobroma cacao Malaysia: Johor OL831110 OL863374 OL863317 OL863431 This study
L. theobromae J73S Theobroma cacao Malaysia: Johor OL831111 OL863375 OL863318 OL863432 This study
Lasiodiplodia viticola CBS128313a hybrid grape Vignoles USA HQ288227 HQ288269 HQ288306 KU696385 Cruywagen et al.52
L. viticola CBS128314 Chardonel USA HQ288228 HQ288270 HQ288307 KU696386 Cruywagen et al.52
Botryosphearia dothidea CBS115476 Prunus sp. Switzerland KF766151 AY236898 MT592470 DQ677944 Slippers et al.83

aEx-type isolates.