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. 2022 May 20;23(10):5763. doi: 10.3390/ijms23105763

Table 4.

Number of differentially expressed genes (DEGs) for (A) GNP treatments vs. unexposed controls (C) in wildtype, ASC-deficient, and NLRP3-deficient THP-1-derived cells, and (B) unexposed wildtype vs. ASC-deficient and NLRP3-deficient THP-1-derived cells. p < 0.001. False discovery rate (FDR) = 11%. The total number of DEGs in panel A is 103 since, from the 40 DEGs for NLRP3-def, one overlaps with GNP-4 nanospheres vs. C (wildtype) and one with GNP-6 nanorods vs. C (ASC-def).

Comparison Cells # of DEGs
A
GNP-1 nanostars vs. C Wild-type 6
GNP-4 nanospheres vs. C Wild-type 9
GNP-6 nanorods vs. C Wild-type 15
GNP-6 nanorods vs. C ASC-def 35
GNP-6 nanorods vs. C NLRP3-def 40
B
Wildtype C vs. ASC-def C 332
Wildtype C vs. NLRP3-def C 219