Table 2.
Annotation summary of every DEG set among the six developmental stages of fruit development and ripening of A. latifolia.
| DEG_set a | Annotated b | COG c | GO d | KEGG e | KOG f | Pfam g | Swiss-Prot h | eggNOG i | Nr j |
|---|---|---|---|---|---|---|---|---|---|
| DAF 30_vs_60 | 3718 | 1736 | 2940 | 1455 | 2053 | 3306 | 2983 | 3664 | 3709 |
| DAF 30_vs_90 | 3405 | 1542 | 2704 | 1234 | 1760 | 3045 | 2756 | 3326 | 3381 |
| DAF 30_vs_120 | 4232 | 1993 | 3435 | 1687 | 2207 | 3823 | 3474 | 4142 | 4209 |
| DAF 30_vs_150 | 5176 | 2477 | 4187 | 2093 | 2771 | 4663 | 4232 | 5093 | 5156 |
| DAF 30_vs_170 | 5991 | 2832 | 4841 | 2386 | 3305 | 5383 | 4807 | 5893 | 5964 |
a DEG: differentially expressed gene. b Annotated: number of differentially expressed transcripts annotated. c COG: clusters of orthologous groups. d GO: gene ontology. e KEGG: Kyoto encyclopedia of genes and genomes. f KOG: eukaryotic orthologous groups. g Pfam: protein family. h Swiss-Prot: a manually annotated and reviewed protein sequences database. i eggNOG: evolutionary genealogy of genes, non-supervised orthologous groups. j Nr: non-redundant protein sequence database.