Table 1.
GenBank accession numbers of sequences used in the multi-gene phylogenetic analyses. T and ET represent holotype and epitype specimens, respectively. Species in bold were derived from this study. N/A: not available.
Species Name | Specimen No. | Locality | GenBank Accession No. | References | ||||
---|---|---|---|---|---|---|---|---|
ITS | LSU | RPB2 | β-Tubulin | Status | ||||
Annulohypoxylon annulatum | CBS 140775 | USA | KU604559 | KY610418 | KY624263 | KX376353 | ET | [2,11,25] |
A. moriforme | CBS 123579 | Martinique | KX376321 | KY610425 | KY624289 | KX271261 | [25] | |
A. truncatum | CBS 140778 | USA | KX376329 | KY610419 | KY624277 | KX376352 | ET | [2,25] |
Daldinia dennisii | CBS 114741 | Australia | JX658477 | KY610435 | KY624244 | KC977262 | T | [2,9,34] |
D. petriniae | MUCL 49214 | Austria | JX658512 | KY610439 | KY624248 | KC977261 | ET | [2,9,34] |
Hypomontagnella barbarensis | STMA 14081 | Argentina | MK131720 | MK131718 | MK135891 | MK135893 | T | [35] |
Hypom. monticulosa | MUCL 54604 | French Guiana | KY610404 | KY610487 | KY624305 | KX271273 | ET | [2] |
Hypom. submonticulosa | CBS 115280 | France | KC968923 | KY610457 | KY624226 | KC977267 | [2,9] | |
Hypoxylon addis | MUCL 52797 | Ethiopia | KC968931 | N/A | N/A | KC977287 | T | [9] |
H. anthochroum | YMJ 9 | Mexico | JN660819 | N/A | N/A | AY951703 | [13] | |
H. aveirense | CMG 29 | Portugal | MN053021 | N/A | N/A | MN066636 | T | [36] |
H. baihualingense | FCATAS 477 | China | MG490190 | N/A | N/A | MH790276 | T | [18] |
H. baruense | UCH 9545 | Panama | MN056428 | N/A | N/A | MK908142 | [32] | |
H. begae | YMJ 215 | USA | JN660820 | N/A | N/A | AY951704 | [13] | |
H. bellicolor | UCH 9543 | Panama | MN056425 | N/A | N/A | MK908139 | [32] | |
H. brevisporum | YMJ 36 | Puerto Rico | JN660821 | N/A | N/A | AY951705 | [13] | |
H. carneum | MUCL 54177 | France | KY610400 | KY610480 | KY624297 | KX271270 | [2] | |
H. cercidicola | CBS 119009 | France | KC968908 | KY610444 | KY624254 | KX271270 | [2,9] | |
H . chrysalidosporum | FCATAS 2710 | China | OL467294 | OL615106 | OL584222 | OL584229 | T | [20] |
H. crocopeplum | CBS 119004 | France | KC968907 | KY610445 | KY624255 | KC977268 | [2] | |
H . cyclobalanopsidis | FCATAS 2714 | China | OL467298 | OL615108 | OL584225 | OL584232 | T | [20] |
H. damuense | FCATAS 4207 | China | ON075427 | ON075433 | ON093251 | ON093245 | T | This study |
H. damuense | FCATAS 4321 | China | ON075428 | ON075434 | ON093252 | ON093246 | This study | |
H. dieckmannii | YMJ 89041203 | China | JN979413 | N/A | N/A | AY951713 | [13] | |
H. duranii | YMJ 85 | China | JN979414 | N/A | N/A | AY951714 | [13] | |
H. erythrostroma | YMJ 90080602 | China | JN979416 | N/A | N/A | AY951716 | [13] | |
H. eurasiaticum | MUCL 57720 | Iran | MW367851 | N/A | MW373852 | MW373861 | [37] | |
H. fendleri | DSM 107927 | USA | MK287533 | MK287545 | MK287558 | MK287571 | [38] | |
H. ferrugineum | CBS 141259 | Austria | KX090079 | N/A | N/A | KX090080 | [23] | |
H. fragiforme | MUCL 51264 | Germany | KM186294 | KM186295 | KM186296 | KM186293 | ET | [38] |
H. fraxinophilum | MUCL 54176 | France | KC968938 | N/A | N/A | KC977301 | ET | [9] |
H. fulvosulphureum | MFLUCC 13-0589 | Thailand | KP401576 | N/A | N/A | KP401584 | T | [39] |
H. fuscum | CBS 113049 | France | KY610401 | KY610482 | KY624299 | KX271271 | ET | [2] |
H. griseobrunneum | CBS 331.73 | India | KY610402 | MH872399 | KY624300 | KC977303 | T | [2,9,40] |
H. guilanense | MUCL 57726 | Iran | MT214997 | MT214992 | MT212235 | MT212239 | T | [15] |
H. haematostroma | MUCL 53301 | Martinique | KC968911 | KY610484 | KY624301 | KC977291 | ET | [35] |
H. hinnuleum | MUCL 3621 | USA | MK287537 | MK287549 | MK287562 | MK287575 | T | [38] |
H. howeanum | MUCL 47599 | Germany | AM749928 | KY610448 | KY624258 | KC977277 | [2,9,41] | |
H. hypomiltum | MUCL 51845 | Guadeloupe | KY610403 | KY610449 | KY624302 | KX271249 | [2] | |
H. invadens | MUCL 51475 | France | MT809133 | MT809132 | MT813037 | MT813038 | T | [42] |
H. investiens | CBS 118183 | Malaysia | KC968925 | KY610450 | KY624259 | KC977270 | [2,9] | |
H. isabellinum | STMA 10247 | Martinique | KC968935 | N/A | N/A | KC977295 | T | [9] |
H. jecorinum | YMJ 39 | Mexico | JN979429 | N/A | N/A | AY951731 | [13] | |
H. jianfengense | FACATAS845 | China | MW984546 | MZ029707 | MZ047260 | MZ047264 | T | [21] |
H. larissae | FACATAS844 | China | MW984548 | MZ029706 | MZ047258 | MZ047262 | T | [21] |
H. lateripigmentum | MUCL 53304 | Martinique | KC968933 | KY610486 | KY624304 | KC977290 | T | [2,9] |
H. lenormandii | CBS 135869 | Cameroon | KY610390 | KY610453 | KY624262 | KM610295 | [2,43] | |
H. liviae | CBS 115282 | Norway | NR155154 | N/A | N/A | KC977265 | ET | [9] |
H. lividicolor | YMJ 70 | China | JN979432 | N/A | N/A | AY951734 | [13] | |
H. lividipigmentum | YMJ 233 | Mexico | JN979433 | N/A | N/A | AY951735 | [13] | |
H. macrosporum | YMJ 47 | Canada | JN979434 | N/A | N/A | AY951736 | [13] | |
H. medogense | FCATAS 4061 | China | ON075425 | ON075431 | ON093249 | ON093243 | T | This study |
H. medogense | FCATAS 4320 | China | ON075426 | ON075432 | ON093250 | ON093244 | This study | |
H. musceum | MUCL 53765 | Guadeloupe | KC968926 | KY610488 | KY624306 | KC977280 | [2,9] | |
H. notatum | YMJ 250 | USA | JQ009305 | N/A | N/A | AY951739 | [13] | |
H. olivaceopigmentum | DSM 10792 | USA | MK287530 | MK287542 | MK287555 | MK287568 | T | [38] |
H. papillatum | ATCC 58729 | USA | NR155153 | KY610454 | KY624223 | KC977258 | T | [2,9] |
H. perforatum | CBS 115281 | France | KY610391 | KY610455 | KY624224 | KX271250 | [2] | |
H. petriniae | CBS 114746 | France | NR155185 | KY610491 | KY624279 | KX271274 | T | [2] |
H. pilgerianum | STMA 13455 | Martinique | KY610412 | N/A | KY624308 | KY624315 | [2] | |
H. porphyreum | CBS 119022 | France | KC968921 | KY610456 | KY624225 | KC977264 | [2,9] | |
H. pseudofendleri | MFLUCC 11-0639 | Thailand | KU940156 | KU863144 | N/A | N/A | [44] | |
H. pseudofuscum | 18264 | Germany | MW367857 | MW367848 | MW373858 | MW373867 | T | [37] |
H. pulicicidum | CBS 122622 | Martinique | JX183075 | KY610492 | KY624280 | JX183072 | T | [2,45] |
H. rickii | MUCL 53309 | Martinique | KC968932 | KY610416 | KY624281 | KC977288 | ET | [2] |
H. rubiginosum | MUCL 52887 | Germany | KC477232 | KY610469 | KY624266 | KY624311 | ET | [2,46] |
H. rutilum | YMJ 181 | France | N/A | N/A | N/A | AY951752 | [13] | |
H. samuelsii | MUCL 51843 | Guadeloupe | KC968916 | KY610466 | KY624269 | KC977286 | ET | [2,9] |
H. shearii | YMJ 29 | Mexico | EF026142 | N/A | N/A | AY951753 | [13] | |
H. spegazzinianum | STMA 14082 | Argentina | KU604573 | N/A | N/A | KU604582 | T | [11] |
H. sporistriatatunicum | UCH 9542 | Panama | MN056426 | N/A | N/A | MK908140 | T | [32] |
H. subgilvum | YMJ 88113007 | China | JQ009315 | N/A | N/A | AY951755 | [13] | |
H. sublenormandii | JF 13026 | Sri Lanka | KM610291 | N/A | N/A | KM610303 | T | [43] |
H. texense | DSM 107933 | USA | MK287536 | MK287548 | MK287561 | MK287574 | T | [38] |
H. ticinense | CBS 115271 | France | JQ009317 | KY610471 | KY624272 | AY951757 | [2,13] | |
H. trugodes | MUCL 54794 | Sri Lanka | KF234422 | NG066380 | KY624282 | KF300548 | ET | [2,9] |
H. ulmophilum | YMJ 350 | Russia | JQ009320 | N/A | N/A | AY951760 | [13] | |
H. vogesiacum | CBS 115273 | France | KC968920 | KY610417 | KY624283 | KX271275 | [2] | |
H. wujiangense | GMBC0213 | China | MT568854 | MT568853 | MT585802 | MT572481 | T | [19] |
H. wuzhishanense | FCATAS2708 | China | OL467292 | OL615104 | OL584220 | OL584227 | T | [20] |
H. zangii | FCATAS 4029 | China | ON075423 | ON075429 | ON093247 | ON093241 | T | This study |
H. zangii | FCATAS 4319 | China | ON075424 | ON075430 | ON093248 | ON093242 | This study | |
Jackrogersella cohaerens | CBS 119126 | Germany | KY610396 | KY610497 | KY624270 | KY624314 | [2] | |
J. multiformis | CBS 119016 | Germany | KC477234 | KY610473 | KY624290 | KX271262 | ET | [2,9] |
Pyrenopolyporus hunteri | MUCL 52673 | Ivory Coast | KY610421 | KY610472 | KY624309 | KU159530 | ET | [2,25] |
P. laminosus | MUCL 53305 | Martinique | KC968934 | KY610485 | KY624303 | KC977292 | T | [2,9] |
P. nicaraguensis | CBS 117739 | Burkina Faso | AM749922 | KY610489 | KY624307 | KC977272 | [2,9,41] | |
Rhopalostroma angolense | CBS 126414 | Ivory Coas | KY610420 | KY610459 | KY624228 | KX271277 | [2] | |
Thamnomyces dendroidea | CBS 123578 | French Guiana | FN428831 | KY610467 | KY624232 | KY624313 | T | [2,47] |
Xylaria hypoxylon | CBS 122620 | Sweden | KY610407 | KY610495 | KY624231 | KX271279 | ET | [2] |
Biscogniauxia nummularia | MUCL 51395 | France | KY610382 | KY610427 | KY624236 | KX271241 | [2] |