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. Author manuscript; available in PMC: 2022 Jul 15.
Published in final edited form as: Am J Cardiol. 2021 May 24;151:51–56. doi: 10.1016/j.amjcard.2021.04.010

Table 2.

Summary of Demographic, Clinical and SCN5A/SCN1B Gene Variant Characteristics

Patient No. Age Sex Cardiac Dx Type of FBDs Gene Exon Type and Function of Mutation Change in Nucleotide Change in Amino Acid MAF (1000genome) MAF (ESP) MAF (gnomAD) SIFT-Prediction Polyphen-2 Prediction Gene References

1 31 M BrS IBS-C SCN5A 22 Missense LofF c.3878T>C p.Phe1293Ser NA NA 0.0005892 Tolerated Benign Sommariva E, et al. Cardiogenetics 2012; 2:e11.
2 32 F BrS IBS-C SCN1B NA Intronic Unknown IVS5+36G>A NA NA NA NA NA NA NA
3 34 F BrS IBS-C SCN5A 22 Missense LofF c.3878T>C p.Phe1293Ser NA NA 0.0005892 Tolerated Benign Sommariva E, et al. Cardiogenetics 2012; 2:e11.
4 35 F DI-Type 1 BrP Functional AB/D SCN1B 5 Missense Unknown c.638G>A p.Gly213Asp 0.0002 0 0.00001768 Damaging Possibly Damaging NA
5 44 M BrS IBS-D SCN5A 27 Missense Unknown c.4789G>A p.Val1597Met NA NA 0.0000177 Damaging Probably Damaging Hedley PL, et al. Hum Mutat. 2009;30:1486–1511.
6 45 F BrS None SCN1B 4 Missense Unknown c.503T>C p.Val168Ala 0 0 NA Tolerated Benign Hasdemir C, et al. Heart Rhythm. 2015;12:1584–1594.
7 57 M BrS None SCN1B 3 Missense LofF c.259G>C p.Glu87Gln 0 0 0.000003978 Tolerated Benign Watanabe H, et al. J Clin Invest. 2008;118:2260–2268.
8 58 F Control None SCN5A 17 Missense Unknown c.3067C>T p.Arg1023Cys NA NA 0.00002018 Tolerated Probably Damaging Watanabe H, et al. Int J Cardiol. 2013;165:e21–3.

BrS = Brugada Syndrome, DI-Type 1 BrP = Drug-Induced Type 1 Brugada Pattern, Dx = Diagnosis, ESP = Exome Sequencing Project, Functional AB/D = Abdominal Bloating/Distension, FBD = Functional Bowel Disorders, gnomAD = Genome Aggregation Database, IBS-C = Irritable Bowel Syndrome Constipation, IBS-D = Irritable Bowel Syndrome Diarrhea, LofF = Loss of Function, MAF = Minor Allele Frequency, 1000 genome = 1000 Human Genome Project Database, Polyphen-2 = Polymorphism Phenotyping 2, SIFT = Sorting Intolerant From Tolerant