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. 2017 Aug 3;145(13):2701–2703. doi: 10.1017/S0950268817001650

Fig. 1.

Fig. 1.

Phylogenetic comparison of Chlamydia gallinacea from backyard poultry in this study. The 16S rRNA (301 bp) and 23S rRNA (329 bp) gene sequences (in red font and accession number) found in the current study are compared with those of other representative Chlamydia spp. (in black font with GenBank accession number) using the Clustalx 1.83 alignment software. In addition, the ompA VD 1–2 (478 bp) and ompA VD 3–4 (311 bp) of C. gallinacea strains identified in in this study are compared with other C. gallinacea from poultry in European countries and China. Based on these alignments, phylogenetic trees were constructed by the neighbor-joining method using the Kimura 2-parameter model with MEGA 6.0. Branch lengths are measured in nucleotide substitutions and numbers show branching percentages in bootstrap replicates. Scale bar represents the percent sequence diversity.