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. Author manuscript; available in PMC: 2022 Sep 2.
Published in final edited form as: Mol Cell. 2021 Aug 10;81(17):3542–3559.e11. doi: 10.1016/j.molcel.2021.07.010

Table 1:

Parameter values, expressed as probabilities per unit time, and their abbreviations used in the main model for the WT and chd1Δ cases (which differ only in the extension rate or stalling during extension), see Figure 6.

Parameter Abbr. WT (Fig. 6B) chd1Δ slow extension (Fig. 6C) chd1Δ stalled extension (Fig. 6D)
Binding BR 0.00001 0.00001 0.00001
Extension ER 0.03 0.0075 0.03
Extension to Retraction ERS 0.003 0.003 0.003
Retraction RR 0.03 0.03 0.03
Retraction to Extension RES 0.003 0.003 0.003
Unbinding UBR 0.000005 0.00001 0.00001
Stalling SR 0 0 0.00001
Relaxation Time Steps TSR 106 106 106
Measurement Time Steps TSM 106 106 106
Measurement Interval MI 10 10 10
Realisations R 100000 100000 100000