TABLE 1.
E. coli strains examined in this study and their electrophoretic profiles
| Host species (strain reference) or ECOR designationa | Allele number at locus:
|
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| IDH | PEP | PGM | ARK | ME1 | ME2 | MPI | ADH1 | MDH | 6G | XDH1 | |
| Gopherus flavomarginatus (57) | 0 | 2 | 4 | 1 | 4 | 9 | 7 | 1 | 3 | 3 | 2 |
| Tachyglosus aculeatus (TA309) | 2 | 3 | 3 | 3 | 2 | 6 | 4 | 3 | 3 | 0 | 2 |
| Tachyglosus aculeatus (TA310) | 2 | 3 | 4 | 3 | 2 | 6 | 3 | 3 | 3 | 3 | 3 |
| Tachyglosus aculeatus (TA311) | 3 | 3 | 4 | 3 | 2 | 6 | 3 | 3 | 3 | 3 | 4 |
| Ornithorhynchus anatinus (TA319) | 3 | 3 | 4 | 3 | 3 | 6 | 3 | 3 | 4 | 3 | 4 |
| Ornithorhynchus anatinus (TA32) | 2 | 3 | 3 | 3 | 2 | 6 | 4 | 3 | 3 | 3 | 3 |
| Marmosa camescens (64) | 4 | 3 | 5 | 3 | 3 | 7 | 3 | 3 | 2 | 3 | 4 |
| Didelphis virginiana (79) | 5 | 3 | 5 | 3 | 2 | 5 | 4 | 7 | 2 | 4 | 4 |
| Didelphis virginiana (2048) | 3 | 3 | 5 | 3 | 3 | 6 | 5 | 0 | 3 | 3 | 4 |
| Didelphis virginiana (2049) | 4 | 4 | 3 | 2 | 4 | 6 | 3 | 0 | 3 | 3 | 3 |
| Didelphis virginiana (2050) | 3 | 3 | 5 | 3 | 4 | 7 | 5 | 0 | 2 | 3 | 4 |
| Philander opossum (1698) | 3 | 3 | 3 | 2 | 2 | 7 | 4 | 4 | 3 | 3 | 5 |
| Cercatetus concinnus (TA002) | 2 | 4 | 3 | 2 | 3 | 7 | 3 | 3 | 5 | 3 | 4 |
| Antechinus bellus (TA148) | 2 | 4 | 3 | 2 | 3 | 7 | 3 | 3 | 3 | 3 | 4 |
| Antechinus flavipes (TA237) | 2 | 3 | 2 | 2 | 4 | 0 | 3 | 4 | 3 | 3 | 4 |
| Antechinus swainsonii (TA153) | 1 | 4 | 1 | 1 | 3 | 6 | 1 | 3 | 3 | 3 | 2 |
| Dasyurus geofroii (TA124) | 1 | 3 | 3 | 1 | 3 | 7 | 2 | 2 | 3 | 3 | 3 |
| Dasyurus hallucatus (TA260) | 2 | 4 | 2 | 2 | 1 | 6 | 3 | 0 | 1 | 3 | 4 |
| Dasyurus maculatus (TA036) | 3 | 3 | 2 | 3 | 3 | 6 | 4 | 3 | 3 | 3 | 3 |
| Sminthopsis macroura (TA244) | 2 | 4 | 2 | 2 | 4 | 7 | 5 | 4 | 3 | 3 | 4 |
| Sminthopsis murina (TA151) | 2 | 2 | 2 | 2 | 4 | 7 | 3 | 3 | 3 | 3 | 4 |
| Sminthopsis delichura (TA120) | 1 | 4 | 1 | 1 | 3 | 7 | 1 | 2 | 3 | 3 | 2 |
| Bettongia penicillata (TA115) | 3 | 4 | 4 | 3 | 2 | 6 | 5 | 4 | 3 | 3 | 0 |
| Lagorchestes hirsutus (TA263) | 2 | 3 | 2 | 2 | 3 | 7 | 3 | 0 | 3 | 3 | 4 |
| Macropus eugenii (TA052) | 3 | 3 | 2 | 3 | 3 | 6 | 4 | 3 | 3 | 3 | 3 |
| Macropus fulginosus (TA004) | 2 | 3 | 3 | 2 | 3 | 6 | 3 | 3 | 5 | 3 | 4 |
| Macropus giganteus (TA057) | 2 | 4 | 2 | 2 | 4 | 7 | 3 | 3 | 5 | 2 | 4 |
| Petrogale lateralis (TA135) | 3 | 3 | 0 | 2 | 3 | 6 | 3 | 3 | 3 | 3 | 3 |
| Perameles nasuta (TA020) | 2 | 3 | 2 | 2 | 2 | 7 | 3 | 3 | 4 | 2 | 4 |
| Petaurus breviceps (TA243) | 1 | 4 | 2 | 2 | 2 | 4 | 3 | 4 | 3 | 3 | 4 |
| Pseudocheirus peregrinus (TA022) | 2 | 4 | 2 | 2 | 3 | 7 | 3 | 3 | 5 | 3 | 4 |
| Trichosurus vulpecula (TA038) | 2 | 4 | 3 | 2 | 3 | 5 | 3 | 3 | 5 | 3 | 4 |
| Phascolarctos cinereus (TA003) | 1 | 3 | 1 | 1 | 2 | 6 | 2 | 2 | 3 | 3 | 2 |
| Sorex sp. (238) | 2 | 1 | 1 | 2 | 2 | 5 | 3 | 4 | 2 | 2 | 2 |
| Sorex sp. (240) | 6 | 2 | 4 | 2 | 3 | 8 | 7 | 0 | 4 | 3 | 4 |
| Tachyglosus aculeatus (TA051) | 2 | 4 | 3 | 2 | 4 | 7 | 4 | 3 | 5 | 2 | 4 |
| Tadarida brasiliensis (259) | 5 | 1 | 3 | 3 | 3 | 7 | 2 | 3 | 3 | 0 | 4 |
| Tadarida brasiliensis (261) | 5 | 1 | 3 | 3 | 3 | 7 | 2 | 3 | 4 | 3 | 4 |
| Tadarida brasiliensis (266) | 4 | 1 | 3 | 2 | 3 | 6 | 2 | 3 | 3 | 3 | 4 |
| Desmodus rotundus (25) | 4 | 2 | 0 | 4 | 3 | 5 | 1 | 3 | 2 | 3 | 4 |
| Desmodus rotundus (26) | 4 | 2 | 2 | 4 | 3 | 5 | 1 | 3 | 2 | 3 | 5 |
| Leptonycteris nivalis (31) | 3 | 2 | 2 | 2 | 3 | 5 | 1 | 2 | 2 | 2 | 3 |
| Leptonycteris nivalis (33) | 3 | 2 | 2 | 2 | 3 | 3 | 3 | 2 | 4 | 3 | 2 |
| Leptonycteris nivalis (36) | 3 | 1 | 3 | 2 | 3 | 5 | 5 | 2 | 6 | 4 | 2 |
| Carollia brevicauda (40) | 3 | 1 | 3 | 2 | 3 | 5 | 4 | 2 | 6 | 2 | 2 |
| Carollia brevicauda (41) | 0 | 1 | 3 | 2 | 3 | 5 | 4 | 2 | 6 | 3 | 2 |
| Carollia brevicauda (42) | 2 | 1 | 4 | 2 | 3 | 6 | 4 | 2 | 6 | 3 | 4 |
| Nyctophilus geoffroyi (TA225) | 2 | 2 | 2 | 2 | 4 | 0 | 2 | 4 | 3 | 3 | 4 |
| Alouatta palliata (1638) | 1 | 4 | 4 | 2 | 4 | 6 | 6 | 5 | 2 | 3 | 3 |
| Alouatta palliata (1639) | 2 | 4 | 4 | 2 | 4 | 6 | 6 | 5 | 2 | 3 | 4 |
| Alouatta palliata (1640) | 1 | 4 | 4 | 2 | 4 | 6 | 6 | 5 | 2 | 3 | 5 |
| Alouatta palliata (1731) | 3 | 5 | 4 | 4 | 3 | 3 | 4 | 0 | 2 | 3 | 3 |
| Alouatta pigra (1699) | 4 | 4 | 5 | 3 | 4 | 4 | 5 | 0 | 4 | 3 | 2 |
| Ateles geoffroyi (1669) | 0 | 2 | 2 | 2 | 2 | 6 | 3 | 5 | 4 | 4 | 2 |
| Papio cynocephalus (B184) | 3 | 3 | 2 | 2 | 3 | 7 | 3 | 3 | 3 | 4 | 4 |
| Papio cynocephalus (B197) | 2 | 3 | 0 | 2 | 3 | 7 | 3 | 3 | 3 | 4 | 4 |
| Papio cynocephalus (B307) | 2 | 3 | 1 | 2 | 3 | 6 | 3 | 3 | 2 | 3 | 4 |
| Papio cynocephalus (B349) | 2 | 3 | 2 | 2 | 3 | 7 | 4 | 3 | 3 | 4 | 4 |
| Papio cynocephalus (B427) | 3 | 3 | 2 | 2 | 1 | 4 | 3 | 3 | 1 | 3 | 4 |
| Papio cynocephalus (B430) | 3 | 3 | 2 | 3 | 3 | 7 | 3 | 3 | 3 | 3 | 4 |
| ECOR7 | 3 | 4 | 4 | 2 | 3 | 7 | 4 | 3 | 3 | 3 | 4 |
| Homo sapiens (45) | 3 | 2 | 2 | 3 | 3 | 5 | 4 | 0 | 3 | 3 | 3 |
| Homo sapiens (46) | 4 | 2 | 2 | 3 | 2 | 5 | 4 | 0 | 3 | 3 | 3 |
| Homo sapiens (47) | 1 | 2 | 3 | 3 | 2 | 5 | 4 | 0 | 3 | 3 | 3 |
| ECOR1 | 4 | 3 | 5 | 3 | 3 | 7 | 4 | 3 | 3 | 3 | 4 |
| ECOR5 | 5 | 3 | 2 | 5 | 4 | 8 | 6 | 3 | 2 | 3 | 3 |
| ECOR8 | 5 | 3 | 3 | 0 | 3 | 7 | 3 | 3 | 3 | 3 | 0 |
| ECOR10 | 3 | 3 | 5 | 5 | 4 | 7 | 4 | 3 | 3 | 3 | 4 |
| ECOR11 | 3 | 3 | 5 | 3 | 3 | 5 | 0 | 3 | 3 | 3 | 4 |
| ECOR12 | 4 | 3 | 5 | 3 | 3 | 6 | 5 | 4 | 3 | 3 | 4 |
| ECOR26 | 2 | 3 | 4 | 2 | 3 | 7 | 3 | 2 | 3 | 3 | 3 |
| ECOR41 | 2 | 3 | 3 | 2 | 1 | 6 | 3 | 2 | 1 | 3 | 3 |
| K-12 MG1655 | 3 | 4 | 5 | 3 | 3 | 5 | 0 | 3 | 3 | 3 | 4 |
| Sylvilagus sp. (80) | 3 | 3 | 3 | 3 | 4 | 6 | 4 | 7 | 4 | 0 | 4 |
| Oryctolagus cuniculus (2355) | 2 | 4 | 3 | 2 | 3 | 7 | 3 | 3 | 3 | 3 | 4 |
| Oryctolagus cuniculus (2356) | 2 | 0 | 3 | 2 | 2 | 6 | 3 | 3 | 2 | 3 | 4 |
| Oryctolagus cuniculus (2357) | 2 | 5 | 3 | 2 | 4 | 8 | 3 | 3 | 2 | 3 | 4 |
| Romerolagus diazi (2372) | 2 | 3 | 3 | 2 | 3 | 6 | 3 | 3 | 2 | 3 | 4 |
| Romerolagus diazi (2373) | 2 | 3 | 3 | 2 | 3 | 7 | 3 | 3 | 2 | 3 | 4 |
| Romerolagus diazi (2374) | 2 | 3 | 3 | 2 | 3 | 7 | 3 | 3 | 2 | 3 | 4 |
| Dasypus sp. (2395) | 3 | 3 | 1 | 1 | 2 | 6 | 3 | 2 | 3 | 3 | 2 |
| Dasypus sp. (2396) | 1 | 3 | 1 | 1 | 2 | 7 | 3 | 2 | 3 | 4 | 2 |
| Nyctomys sp. (69) | 1 | 3 | 3 | 2 | 3 | 3 | 1 | 3 | 4 | 3 | 4 |
| Baiomys musculus (75) | 3 | 2 | 3 | 2 | 3 | 5 | 5 | 6 | 4 | 4 | 4 |
| Habromys sp. (88) | 4 | 3 | 3 | 2 | 4 | 4 | 5 | 5 | 5 | 4 | 4 |
| Habromys sp. (89) | 3 | 3 | 3 | 2 | 3 | 5 | 5 | 8 | 5 | 3 | 4 |
| Peromyscus sp. (71) | 3 | 2 | 3 | 2 | 3 | 3 | 4 | 4 | 5 | 3 | 4 |
| Peromyscus sp. (72) | 3 | 2 | 3 | 4 | 3 | 3 | 4 | 4 | 5 | 3 | 4 |
| Peromyscus sp. (73) | 0 | 0 | 2 | 2 | 3 | 3 | 4 | 8 | 2 | 3 | 4 |
| Peromyscus megalops (95) | 2 | 3 | 3 | 3 | 2 | 5 | 6 | 3 | 5 | 3 | 4 |
| Peromyscus boylii (96) | 2 | 3 | 4 | 3 | 3 | 5 | 6 | 5 | 6 | 3 | 4 |
| Peromyscus boylii (97) | 1 | 3 | 4 | 3 | 3 | 5 | 6 | 6 | 6 | 3 | 4 |
| Oryzomys sp. (58) | 2 | 5 | 3 | 2 | 3 | 3 | 6 | 3 | 6 | 4 | 4 |
| Oryzomys sp. (59) | 2 | 2 | 3 | 3 | 2 | 5 | 4 | 5 | 2 | 4 | 4 |
| Oryzomys sp. (60) | 2 | 2 | 3 | 3 | 2 | 5 | 4 | 6 | 6 | 3 | 5 |
| Sigmodon mascotensis (67) | 1 | 3 | 4 | 2 | 3 | 5 | 5 | 3 | 5 | 3 | 2 |
| Sigmodon mascotensis (68) | 2 | 3 | 3 | 2 | 3 | 3 | 5 | 3 | 5 | 3 | 5 |
| Neotoma albigula (296) | 4 | 2 | 4 | 2 | 3 | 7 | 7 | 5 | 4 | 3 | 4 |
| Neotoma albigula (297) | 3 | 2 | 3 | 2 | 2 | 8 | 4 | 3 | 5 | 3 | 2 |
| Neotoma albigula (298) | 6 | 2 | 3 | 2 | 2 | 8 | 4 | 3 | 5 | 3 | 3 |
| Zyzomys argurus (TA140) | 2 | 3 | 3 | 2 | 3 | 7 | 3 | 3 | 2 | 3 | 4 |
| Zyzomys argurus (TA141) | 4 | 3 | 2 | 2 | 3 | 7 | 3 | 3 | 3 | 3 | 3 |
| Zyzomys argurus (TA150) | 4 | 4 | 1 | 2 | 3 | 7 | 2 | 3 | 2 | 2 | 4 |
| Rattus rattus (TA201) | 2 | 3 | 2 | 2 | 3 | 7 | 3 | 3 | 3 | 3 | 4 |
| Rattus rattus (TA063) | 3 | 4 | 3 | 2 | 3 | 7 | 2 | 3 | 2 | 2 | 3 |
| Rattus lutreolus (TA053) | 3 | 2 | 4 | 2 | 3 | 7 | 4 | 4 | 2 | 4 | 4 |
| Rattus lutreolus (TA107) | 3 | 4 | 4 | 2 | 3 | 6 | 4 | 3 | 3 | 3 | 4 |
| Rattus fuscipes (TA216) | 1 | 2 | 2 | 1 | 3 | 6 | 2 | 2 | 3 | 3 | 2 |
| Rattus fuscipes (TA001) | 4 | 4 | 3 | 2 | 3 | 7 | 4 | 3 | 3 | 4 | 4 |
| Pseudomys apodemoides (TA093) | 1 | 4 | 2 | 1 | 3 | 7 | 2 | 2 | 3 | 4 | 3 |
| Pseudomys apodemoides (TA096) | 4 | 3 | 1 | 2 | 3 | 7 | 4 | 3 | 3 | 3 | 4 |
| Mus musculus (TA072) | 2 | 3 | 3 | 2 | 3 | 7 | 3 | 3 | 2 | 3 | 4 |
| Mus musculus (TA074) | 2 | 4 | 2 | 2 | 3 | 7 | 3 | 3 | 3 | 3 | 4 |
| Mus musculus (TA105) | 3 | 4 | 2 | 3 | 3 | 7 | 4 | 3 | 2 | 2 | 3 |
| Mus musculus (3490) | 3 | 4 | 3 | 1 | 3 | 8 | 3 | 3 | 3 | 4 | 3 |
| Mus musculus (3491) | 2 | 4 | 2 | 1 | 3 | 8 | 3 | 2 | 3 | 4 | 3 |
| Mus musculus (3492) | 3 | 4 | 2 | 2 | 3 | 8 | 2 | 2 | 2 | 4 | 3 |
| Notomys mitchelli (TA098) | 2 | 4 | 3 | 2 | 3 | 7 | 3 | 3 | 3 | 3 | 4 |
| Notomys mitchelli (TA100) | 2 | 3 | 2 | 2 | 3 | 7 | 4 | 3 | 3 | 4 | 4 |
| Notomys mitchelli (TA102) | 2 | 3 | 2 | 1 | 4 | 7 | 2 | 2 | 3 | 3 | 2 |
| Hydrochaeris hydrochaeris (2079) | 3 | 2 | 3 | 3 | 2 | 6 | 4 | 3 | 3 | 3 | 0 |
| Hydrochaeris hydrochaeris (2080) | 3 | 3 | 3 | 3 | 2 | 6 | 4 | 3 | 3 | 3 | 0 |
| Liomys pictus (76) | 3 | 2 | 3 | 3 | 2 | 6 | 1 | 3 | 5 | 3 | 4 |
| Liomys pictus (78) | 3 | 2 | 3 | 4 | 2 | 6 | 1 | 3 | 5 | 4 | 4 |
| Liomys pictus (19) | 5 | 3 | 3 | 2 | 3 | 5 | 4 | 6 | 5 | 3 | 2 |
| Liomys pictus (20) | 5 | 3 | 3 | 4 | 3 | 3 | 4 | 6 | 5 | 3 | 2 |
| Liomys pictus (21) | 5 | 3 | 3 | 4 | 3 | 5 | 4 | 6 | 5 | 3 | 2 |
| Dipodomys merriami (286) | 3 | 2 | 3 | 3 | 3 | 6 | 3 | 5 | 5 | 2 | 3 |
| Dipodomys merriami (287) | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 5 | 5 | 2 | 4 |
| Dipodomys merriami (288) | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 5 | 5 | 2 | 4 |
| Perognathus penicillatus (820) | 2 | 2 | 3 | 2 | 3 | 3 | 7 | 5 | 4 | 3 | 4 |
| Perognathus penicillatus (821) | 2 | 2 | 3 | 2 | 3 | 3 | 7 | 4 | 4 | 3 | 0 |
| Perognathus penicillatus (822) | 2 | 2 | 3 | 2 | 3 | 3 | 7 | 5 | 4 | 3 | 0 |
| Tursiops truncatus (2025) | 2 | 3 | 3 | 3 | 3 | 6 | 4 | 5 | 3 | 2 | 4 |
| Tursiops truncatus (2026) | 2 | 3 | 3 | 4 | 3 | 6 | 4 | 5 | 3 | 2 | 4 |
| Tursiops truncatus (2027) | 2 | 3 | 2 | 4 | 3 | 6 | 4 | 5 | 3 | 2 | 4 |
| Felis concolor (268) | 3 | 3 | 2 | 3 | 2 | 6 | 4 | 3 | 1 | 3 | 2 |
| Felis concolor (269) | 3 | 3 | 3 | 2 | 1 | 6 | 5 | 3 | 3 | 3 | 0 |
| Felis catus (8) | 4 | 3 | 3 | 2 | 3 | 6 | 4 | 5 | 3 | 3 | 3 |
| Felis catus (9) | 4 | 3 | 3 | 2 | 3 | 3 | 3 | 5 | 3 | 3 | 4 |
| Felis catus (10) | 4 | 3 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 3 | 3 |
| Panthera onca (65) | 3 | 3 | 4 | 2 | 2 | 7 | 5 | 3 | 6 | 4 | 3 |
| Panthera onca (66) | 3 | 3 | 4 | 2 | 2 | 7 | 5 | 3 | 6 | 4 | 3 |
| Panthera onca (270) | 3 | 3 | 4 | 2 | 3 | 3 | 3 | 4 | 6 | 3 | 3 |
| Lutra longicaudis (1930) | 2 | 2 | 3 | 0 | 3 | 6 | 3 | 3 | 2 | 3 | 3 |
| Lutra longicaudis (1931) | 2 | 3 | 3 | 3 | 3 | 6 | 3 | 4 | 3 | 3 | 4 |
| Lutra longicaudis (1932) | 2 | 3 | 2 | 2 | 3 | 6 | 2 | 3 | 2 | 3 | 4 |
| Bassariscus astutus (84) | 4 | 4 | 2 | 3 | 4 | 4 | 0 | 4 | 5 | 3 | 4 |
| Bassariscus astutus (815) | 2 | 4 | 3 | 2 | 3 | 5 | 4 | 3 | 4 | 4 | 2 |
| Bassariscus astutus (816) | 2 | 4 | 3 | 2 | 3 | 5 | 4 | 3 | 2 | 3 | 2 |
| Bassariscus astutus (817) | 2 | 4 | 2 | 2 | 3 | 3 | 4 | 2 | 2 | 3 | 2 |
| Nasua narica (2060) | 4 | 0 | 3 | 2 | 3 | 7 | 3 | 3 | 2 | 3 | 3 |
| Nasua narica (2062) | 2 | 3 | 3 | 2 | 3 | 7 | 2 | 2 | 3 | 3 | 3 |
| Procyon lotor (2064) | 5 | 2 | 5 | 3 | 3 | 7 | 3 | 4 | 2 | 4 | 0 |
| Procyon lotor (2065) | 5 | 2 | 5 | 3 | 3 | 7 | 3 | 4 | 2 | 4 | 0 |
| Procyon lotor (2066) | 5 | 2 | 3 | 2 | 3 | 5 | 2 | 2 | 2 | 0 | 0 |
| Canis latrans (90) | 3 | 4 | 4 | 3 | 4 | 4 | 4 | 3 | 2 | 4 | 1 |
| Canis latrans (91) | 3 | 4 | 4 | 3 | 3 | 5 | 4 | 4 | 3 | 4 | 1 |
| Canis latrans (92) | 3 | 4 | 4 | 3 | 3 | 5 | 4 | 4 | 3 | 4 | 1 |
| Canis latrans (824) | 3 | 3 | 3 | 2 | 3 | 6 | 4 | 3 | 1 | 4 | 4 |
| Canis latrans (825) | 3 | 3 | 3 | 3 | 3 | 6 | 4 | 3 | 3 | 3 | 4 |
| Canis latrans (830) | 0 | 3 | 3 | 4 | 3 | 3 | 4 | 5 | 3 | 3 | 3 |
| Canis familiaris (1) | 2 | 3 | 3 | 4 | 3 | 3 | 6 | 5 | 3 | 3 | 4 |
| Canis familiaris (2) | 2 | 3 | 4 | 4 | 3 | 5 | 6 | 4 | 2 | 3 | 4 |
| Canis familiaris (3) | 2 | 3 | 4 | 4 | 3 | 3 | 6 | 5 | 2 | 3 | 4 |
| Urocyon cinereoargenteus (272) | 4 | 4 | 4 | 3 | 1 | 1 | 0 | 3 | 3 | 3 | 1 |
| Urocyon cinereoargenteus (299) | 3 | 2 | 4 | 2 | 1 | 1 | 5 | 5 | 3 | 3 | 3 |
| Urocyon cinereoargenteus (300) | 4 | 4 | 4 | 2 | 3 | 5 | 5 | 5 | 3 | 3 | 4 |
| Urocyon cinereoargenteus (301) | 4 | 4 | 4 | 3 | 3 | 5 | 5 | 5 | 4 | 3 | 2 |
| ECOR23 | 3 | 4 | 4 | 2 | 3 | 7 | 4 | 3 | 3 | 3 | 4 |
| Trichechus manatus (1735) | 4 | 5 | 6 | 5 | 3 | 6 | 7 | 0 | 2 | 3 | 3 |
| Trichechus manatus (1736) | 4 | 5 | 6 | 3 | 3 | 6 | 7 | 0 | 2 | 3 | 3 |
| Tapirus bairdii (1666) | 4 | 3 | 4 | 2 | 3 | 6 | 5 | 0 | 5 | 3 | 4 |
| Tapirus bairdii (1667) | 0 | 3 | 4 | 2 | 3 | 8 | 5 | 5 | 5 | 3 | 4 |
| Tapirus bairdii (1668) | 0 | 3 | 4 | 2 | 3 | 8 | 4 | 4 | 5 | 4 | 3 |
| Tapirus bairdii (1937) | 2 | 1 | 3 | 0 | 3 | 6 | 3 | 4 | 2 | 3 | 4 |
| Tapirus terrestris (2381) | 4 | 3 | 4 | 3 | 2 | 7 | 4 | 4 | 3 | 4 | 4 |
| Tapirus terrestris (2382) | 4 | 3 | 4 | 3 | 3 | 5 | 5 | 3 | 3 | 4 | 3 |
| Equus caballus (807) | 3 | 2 | 4 | 2 | 3 | 5 | 4 | 0 | 5 | 3 | 4 |
| Equus caballus (808) | 4 | 2 | 3 | 2 | 3 | 5 | 3 | 0 | 6 | 3 | 4 |
| Equus caballus (809) | 3 | 2 | 3 | 2 | 3 | 6 | 4 | 0 | 5 | 3 | 4 |
| ECOR45 | 2 | 3 | 3 | 2 | 3 | 7 | 2 | 2 | 3 | 3 | 3 |
| Tayassu tajacu (2055) | 1 | 3 | 3 | 2 | 3 | 7 | 3 | 3 | 3 | 3 | 3 |
| Odocoeileus virginianus (63) | 2 | 2 | 3 | 2 | 2 | 7 | 3 | 3 | 2 | 3 | 1 |
| Odocoeileus virginianus (1984) | 5 | 4 | 4 | 2 | 3 | 6 | 3 | 3 | 3 | 3 | 3 |
| Odocoeileus virginianus (1985) | 3 | 3 | 4 | 2 | 2 | 6 | 4 | 0 | 3 | 3 | 4 |
| ECOR27 | 2 | 3 | 3 | 2 | 3 | 7 | 3 | 2 | 3 | 3 | 3 |
| Bos taurus (2376) | 5 | 3 | 4 | 2 | 3 | 7 | 4 | 3 | 2 | 3 | 4 |
| Bos taurus (2379) | 6 | 2 | 3 | 3 | 2 | 7 | 3 | 4 | 3 | 3 | 0 |
| ECOR33 | 2 | 3 | 3 | 2 | 3 | 6 | 3 | 2 | 3 | 3 | 3 |
| Ovis aries (1965) | 4 | 3 | 3 | 2 | 4 | 6 | 3 | 3 | 3 | 3 | 3 |
| Ovis aries (1966) | 4 | 3 | 3 | 2 | 4 | 6 | 3 | 4 | 3 | 3 | 3 |
| Ovis aries (1967) | 3 | 3 | 5 | 3 | 2 | 5 | 5 | 0 | 3 | 3 | 4 |
| Sula nebouxi (137) | 4 | 7 | 5 | 4 | 3 | 0 | 2 | 3 | 2 | 4 | 3 |
| Aquila chrysaetus (55) | 5 | 6 | 6 | 2 | 4 | 0 | 1 | 2 | 2 | 3 | 3 |
| Aratinga canicularis (48) | 5 | 6 | 4 | 3 | 3 | 0 | 1 | 3 | 1 | 3 | 4 |
| Calothorax lucifer (207) | 6 | 2 | 4 | 2 | 2 | 0 | 3 | 3 | 2 | 2 | 4 |
| Amazilia beryllina (225) | 3 | 4 | 4 | 2 | 1 | 0 | 1 | 3 | 1 | 1 | 4 |
| Henicorhina leucophrys (151) | 4 | 3 | 5 | 3 | 3 | 0 | 2 | 5 | 2 | 3 | 3 |
| Basileuterus belli (108) | 4 | 3 | 4 | 2 | 3 | 0 | 1 | 2 | 2 | 1 | 3 |
| Atlapetes brunneinucha (126) | 3 | 2 | 5 | 3 | 3 | 0 | 2 | 3 | 2 | 3 | 4 |
| Passer domesticus (345) | 6 | 7 | 4 | 4 | 2 | 0 | 3 | 3 | 2 | 4 | 4 |
| Empidonax sp. (161) | 4 | 3 | 2 | 3 | 4 | 0 | 1 | 4 | 2 | 1 | 2 |
a
For additional information regarding the ECOR isolates, see reference 32.