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SNR analyses
| MLVA type | SNR type | No. isolates | SNRs | |||
|---|---|---|---|---|---|---|
| HM1 | HM2 | HM6 | HM13 | |||
| Gt/Kha | SubGT-1 | 32 | 79 | 108 | 91 | 118 |
| Gt/Kha | SubGT-1a | 1 | 80 | 108 | 91 | 118 |
| Gt/ChU | SubGT-1 | 18 | 79 | 108 | 91 | 118 |
| Gt/KamBel | SubGt-2 | 47 | 83 | 110 | 90 | 118 |
| Gt/KamBel | SubGt-2a | 1 | 83 | 110 | 91 | 118 |
SNR, Single nucleotide repeat; MLVA, multilocus variable number tandem repeat (VNTR) analysis.
