Table 2.
mTOR | EGFR | MEK-1 | Yap1 | |
---|---|---|---|---|
ΔG (kcal/mol) | –9.10 | –9.5 | –9.80 | –8.40 |
Conventional H-bonds |
Ser2165 (1.76) Lys2187 (2.25) Val2240 (1.76) |
Cys797 (2.69) | Ile216 (3.37) Lys97 (2.85) Asp208 (3.44) |
Tyr219 (2.29) Lys221 (2.93) His229 (3.37) |
Alkyl interactions | Pro2169, Leu2185 | Leu718, Lys745 | Met219, Leu215, Leu118 Ile141 |
|
Fluorine | Glu2190 (2.25), Gly2238 (3.47), Trp2239 (3.48) | Asp855 (3.48) | Gln213 (3.28) | |
Pi-pi stacked | Trp223 | Phe723 | Thr219, Tyr219 | |
PI-sigma | Leu2185 | Val726 | ||
Pi-anion | Asp2357 | Asp855 | Asp190, Asp208 | |
Pi-cation | Lys221 | |||
Pi-sulfur | Met143 | |||
van der Waals forces | Ile2237, Ile2163, Gln2167, Met2345, Ile2356 | Gly857, Leu858, Asn842, Arg841, Leu844, Gly796, Ala743, Met790 | Val211, Leu115, Ser212, Phe209, Gly210, Phe129, Ile99, Arg189, Arg234, Met230 | |
Hydrophobic contacts | Leu718a (3.66)-atm5872 Phe723a (3.46)-atm5875 Lys745a (3.73)-atm5863 |
Leu718a (3.66)-atm5872 Phe723a (3.46)-atm5876 Lys745a (3.73)-atm5863 |
Ile141a (3.54)-atm2767 Asp190a (3.74)-atm2759 |
Ala208a (3.90)-atm1418 Phe224a (3.94)-atm1421 Leu279a (3.81)-atm1423 Thr309a (3.87)-atm1414 Val311a (3.87)-atm1411 Leu367a (3.98)-atm1425 Phe370a (3.80)-atm1425 Ile372a (3.95)-atm1415 Phe392a (3.76)-atm1419 Phe392a (3.91)-atm1425 |
mTOR, mammalian target of rapamycin; EGFR, epidermal growth factor receptor; MEK-1, mitogen-activated protein kinase/extracellular signal-regulated kinase kinase 1; Yap, yes-associated protein.