Skip to main content
. Author manuscript; available in PMC: 2022 Jun 1.
Published in final edited form as: Nature. 2022 Mar 2;603(7901):522–527. doi: 10.1038/s41586-022-04469-8

Extended Data Figure 4 ∣. Peripheral 5His coordination site of 2CoII-(AB)2 and rotamer analysis of the H100 side chain.

Extended Data Figure 4 ∣

a, CoII-coordination in the dimer interface of (AB)2 with the 2mFo-DFc electron density map (grey mesh) contoured at 5.0 σ (metal) and 1.5 σ (ligand). Coordination distances and angles between CoII and ligands are shown on the right. b, Possible rotamer orientations of H100 residue in the crystal structure of 2NiII-(AB)2. Rotamers were generated with the combination of χ1 (torsion angle of Cα-Cβ = 60–300°, 60° interval) and χ2 (torsion angle of Cβ-Cγ = 0–330°, 30° interval). c, Averaged number of atomic contacts of H100 rotamers as a function of van der waals (VdW) overlap. Error bars reflect the standard deviations of the atomic contacts in rotamers with fixed χ1 and variable χ2. Compared to the original conformation of H100, all possible rotamers show significant clashes with proximal residues. d, Location of proximal residues overlapped with H100 rotamers.