Table 3.
Target genes that directly interacted with miR164c’ targets and involved in the plant hormone related pathway and degradome transcripts per billion (TPB) values identified in unaged and artificially aged WT, MIM164c, and OE164c seeds
| miRNA | Target gene | Aa-WT | A-MIM164c | A-OE164c | Bb-WT | B-MIM164c | B-OE164c |
|---|---|---|---|---|---|---|---|
| miR172a-d | RSR1 | 0 | 0 | 95.2 | 31,275 | 12,201.1 | 33,577.3 |
| miR160a-f | OsARF8 | 901.6 | 532 | 866.2 | 7775.6 | 642.2 | 6885.6 |
| OsARF18 | 14,726.9 | 9144.8 | 11,356.4 | 26,436.9 | 3382.1 | 13,611.7 | |
| OsARF22 | 11,292 | 7092.9 | 10,014.2 | 28,078.4 | 6806.9 | 22,398.2 | |
| miR393a,b | OsTIR1 | 687 | 126.7 | 171.3 | 3110.2 | 1455.6 | 1528.7 |
| miR172d | Os06g0154200 | 0 | 0 | 14.3 | 0 | 0 | 0 |
| miR171a-i | Os02g0663100 | 42.9 | 50.7 | 133.3 | 864 | 128.4 | 478.5 |
| miR167a-c | OsARF12 | 42.9 | 118.2 | 88.8 | 201.6 | 42.8 | 159.5 |
| miR5075 | OsNAC52 | 42.9 | 25.3 | 38.1 | 259.2 | 0 | 39.9 |
| miR812a-e | MOC1 | 0 | 0 | 38.1 | 0 | 0 | 46.5 |
| miR529a | Os07g0107800 | 0 | 0 | 0 | 0 | 0 | 13.3 |
| miR156c,e | MYB | 0 | 0 | 38.1 | 0 | 0 | 0 |
aA indicates unaged seeds
bB indicates artificially aged seeds