TABLE 1.
Information of top 20 genes ranked according to AUC for single malignant cell distinguishing and genes included in the prediction model
Rank | Gene symbol | AUC | Sensitivity | Specificity | |log2FC| | Secreted or membrane‐bound proteins | Included in the regression model | Coefficients |
---|---|---|---|---|---|---|---|---|
1 | KRT18 | 0.927 | 0.903 | 0.865 | 1.855 | No | Yes | 0.8449 |
2 | KRT8 | 0.924 | 0.839 | 0.923 | 1.851 | No | No | – |
3 | NAPSA | 0.921 | 0.899 | 0.881 | 1.994 | No | Yes | 1.2584 |
4 | MUC1 | 0.916 | 0.907 | 0.861 | 1.729 | Yes | No | – |
5 | WFDC2 | 0.912 | 0.897 | 0.850 | 1.898 | No | No | – |
6 | SFTPB | 0.901 | 0.888 | 0.854 | 1.989 | No | No | – |
7 | HOPX | 0.900 | 0.879 | 0.827 | 1.693 | No | No | – |
8 | KRT7 | 0.892 | 0.867 | 0.865 | 1.468 | No | Yes | 1.5488 |
9 | EPCAM | 0.885 | 0.885 | 0.837 | 1.485 | Yes | No | – |
10 | KRT19 | 0.884 | 0.839 | 0.867 | 1.413 | No | No | – |
11 | SFTA2 | 0.878 | 0.840 | 0.878 | 1.218 | No | No | – |
12 | ZFP36L1 | 0.877 | 0.812 | 0.828 | 1.232 | No | No | – |
13 | ERRFI1 | 0.874 | 0.842 | 0.831 | 1.671 | No | No | – |
14 | C8orf4 | 0.873 | 0.840 | 0.833 | 2.120 | No | No | – |
15 | ELF3 | 0.872 | 0.878 | 0.827 | 1.561 | No | No | – |
16 | NKX2‐1 | 0.865 | 0.924 | 0.790 | 1.109 | Yes | No | – |
17 | RNASE1 | 0.865 | 0.830 | 0.824 | 1.169 | No | No | – |
18 | GPRC5A | 0.864 | 0.813 | 0.781 | 1.025 | Yes | Yes | 0.6344 |
19 | CLDN4 | 0.862 | 0.879 | 0.807 | 1.247 | Yes | No | – |
20 | SLC34A2 | 0.861 | 0.875 | 0.822 | 1.461 | Yes | No | – |
… | ||||||||
34 | IRX2 | 0.835 | 0.950 | 0.701 | 1.734 | No | Yes | 0.7221 |
… | ||||||||
64 | CAPN8 | 0.806 | 0.949 | 0.652 | 0.942 | No | Yes | 0.4969 |
… | No | |||||||
215 | SPINK13 | 0.725 | 0.992 | 0.456 | 1.010 | Yes | Yes | 2.3251 |
Abbreviations: AUC, area under the curve; FC, fold change.