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. 2022 May 19;13:824217. doi: 10.3389/fmicb.2022.824217

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Copyright © 2022 Agius, Johnson-Mackinnon, Fong, Gall, Lam, Basile, Kok, Arnott, Sintchenko and Rockett.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Genomic and epidemiological diversity of clinical and culture SARS-CoV-2 sequences. The SARS-CoV-2 phylogeny was constructed in a local version of Nextstrain (auspice.us) and shows the evolutionary relationship of SARS-CoV-2 genomes sequenced within this study (black dots) and a subsample of publicly available SARS CoV-2 genomes collected globally (n = 1,079). The tree branch lengths represent divergence, with sequences rooted relative to early samples collected in Wuhan, China (Wuhan-Hu-1/2019).