Skip to main content
. 2022 May 2;18(5):e1010023. doi: 10.1371/journal.ppat.1010023

Table 1. Details of numbers of lineages and sequences available for each Cosmopolitan subclade at whole genome and N gene level.

Whole genome N gene
Subclade Lineages Number of sequences Year of first sequence Lineages Number of sequences Year of first sequence
AF1a 2 24 1984 10 377 1982
AF1b 10 251 1981 10 471 1981
AF1c 0 3 1986 0 6 1986
AF4 0 8 1950 1 13 1950
AM1 0 4 1982 6 58 1981
AM2a 1 10 1991 4 136 1990
AM2b 0 2 2009 0 24 1986
AM3a 0 5 1986 20 172 1985
AM3b 0 4 1986 10 108 1986
AM4 0 4 1974 1 19 1974
CA1 1 25 1974 9 224 1974
CA2 1 15 1993 7 106 1993
CA3 0 7 1991 6 45 1991
CE 1 15 1990 1 19 1985
EE 1 15 1986 1 47 1977
ME1a 4 101 1976 4 195 1976
ME1b 0 2 1993 0 7 1993
ME2 4 38 1989 6 66 1989
NEE 6 71 1986 6 78 1985
WE 1 14 1986 1 148 1974
YUGCOW 0 2 1978 0 6 1978
YUGFOX 0 1 1972 0 12 1972