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BWA Alignment (Sequential)
| Alignment Type | Containers | BWA Alignment (seconds) | Slowdown |
|---|---|---|---|
| Non Secure | 91 | 1 | |
| Single-end | SCONE | 3291 | 36.1 |
| Graphene | 10603 | 117 | |
| Non Secure | 15423 | 1 | |
| Paired-end | SCONE | >173K | >41 |
| Graphene | >173K | >41 |
A single-end reads file has 309K reads and each read is 100bp long. A pair end of reads file has 24M reads each. Non secure refers to BWA execution w/o SGX.
