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Comparison of HySec-Flow against Scone or Graphene for Running BWA
| Number of Partitions | SCONE (Sequential) Total time (s) | HySec-Flow parallel SCONE Total time (s) | Speedup | Graphene (Sequential) Total time (s) | HySec-Flow parallel Graphene Total time (s) | Speedup |
|---|---|---|---|---|---|---|
| 1 | 3291 | 3227.48 | 1.02 | 10603 | 11025.41 | 0.96 |
| 10 | 3291 | 58.27 | 56.47 | 10603 | 412.66 | 25.7 |
| 20 | 3291 | 36.68 | 89.71 | 10603 | 300.9 | 35.23 |
| 40 | 3291 | 21.34 | 154.19 | 10603 | 245.84 | 43.13 |
| 80 | 3291 | 15.52 | 211.94 | 10603 | 217.23 | 48.80 |
