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. 2022 May 23;11:e74410. doi: 10.7554/eLife.74410

Figure 6. Xrn1 binds to Dcp2 and is directly recruited to different decapping complexes by Dcp2.

(A) Two-hybrid analyses of Xrn1 interactions with Dcp1, Edc3, Pat1, Upf1, and an N-terminally truncated Dcp2 fragment in WT cells. (B) Two-hybrid analyses of Dcp2-bridged interactions between Xrn1 and Dcp1, Edc3, or Upf1. (C) Two-hybrid analyses of interactions between Xrn1 and Pat1 or N-terminally truncated Dcp2. (D) Two-hybrid analyses of Xrn1 binding to an internal Dcp2 fragment. See also Figure 6—figure supplement 1. (E) Dcp1:Xrn1, Edc3:Xrn1, and Upf1:Xrn1 interactions in tester strains harboring Dcp2 C-terminal truncations and EDC3 or edc3Δ alleles. (F) Two different Xrn1-containing decapping complexes inferred from two-hybrid analyses in B and E. Allele schematics and two-hybrid analyses as in Figure 1.

Figure 6.

Figure 6—figure supplement 1. Xrn1 binds to an internal region of Dcp2.

Figure 6—figure supplement 1.

(A) Xrn1 binds to specific Dcp2 fragments. A panel of Dcp2 fragments was tested for interaction with Xrn1 in two-hybrid assays. The ND244 and ND315 fragments exhibited weak interaction and the F5-C6 fragment exhibited strong interaction. The Xrn1-binding site on the F5-C6 was mapped further in Figure 6D. (B) Interactions between Xrn1 and two internal fragments of Dcp2, F5-C6, or F5-C5, are independent of Edc3, Upf1, or Pat1. Two-hybrid interactions between Xrn1 and the Dcp2 F5-C6 or F5-C5 fragments were assessed in the wild-type tester strain and in tester strains containing single or double deletions of EDC3, UPF1, and PAT1.