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. 2022 May 8;23(6):e54157. doi: 10.15252/embr.202154157

Figure 1. NTRAS is essential for normal endothelial cell function and vital in vivo .

Figure 1

  1. Murine Ntras enrichment in endothelial cells versus other heart‐derived cell types (data acquired from GSE95755; Quaife‐Ryan et al, 2017) (n = 4 mice).
  2. Changes in lncRNA expression from HUVECs exposed to hypoxia (0.2% O2 for 12 h or 24 h), determined by ribo‐minus RNA deep sequencing (data acquired from GSE107033; Neumann et al, 2018); NTRAS is highlighted (n = 2 independent biological replicates).
  3. Validation of hypoxia‐induced NTRAS expression at the indicated time points by RT–qPCR (n = 4 independent biological replicates).
  4. Subcellular localization of NTRAS and control transcripts, assayed by nuclear‐cytoplasmic fractionation of HUVECs and RT–qPCR (n = 3 independent biological replicates).
  5. FITC‐dextran‐based in vitro permeability comparing control and NTRAS‐silenced HUVECs (n = 5 independent biological replicates).
  6. Cumulative in vitro sprout lengths of control and NTRAS‐silenced HUVECs under basal conditions and VEGFA stimulation (n = 3–10 independent biological replicates).
  7. Cell cycle analysis in Ntras‐silenced H5V cells (n = 3 independent biological replicates).
  8. TMR‐dextran‐based assessment of vascular permeability in vivo, comparing heart homogenates from control and Ntras‐silenced mice. Data normalized to organ and body weight (n = 11–12 mice per group). Experimental outline on the left.
  9. Survival of control and Ntras‐silenced mice under basal conditions (black, n = 21–23 mice per group) and in hind limb ischemia (HLI; red, n = 8 mice per group). Number of survivors is indicated; experimental outline on the left.

Data information: In (A, C–H) data are represented as mean ± SEM. n.s.: non‐significant, *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001. (A) One‐way ANOVA, (C–E, H) two‐tailed unpaired t‐test, (G) two‐way ANOVA, and (I) Mantel‐Cox‐test.

Source data are available online for this figure.