Table 4.
Description | Gene markers | GBM | |||
---|---|---|---|---|---|
None | Purity | ||||
Cor | P | Cor | P | ||
CD8+ T cell | CD8A | 0.093 | 0.251 | −0.009 | 0.915 |
CD8B | 0.168 | 0.038 | 0.069 | 0.420 | |
T cell (general) | CD3D | 0.275 | ∗∗ | 0.088 | 0.308 |
CD3E | 0.266 | ∗∗ | 0.121 | 0.160 | |
CD2 | 0.273 | ∗∗ | 0.092 | 0.285 | |
B cell | CD19 | 0.043 | 0.600 | −0.026 | 0.760 |
CD79 A | −0.037 | 0.654 | −0.087 | 0.313 | |
Monocyte | CD86 | 0.313 | ∗∗∗ | 0.111 | 0.198 |
CSF1R | 0.359 | ∗∗∗ | 0.166 | 0.053 | |
TAM | CCL2 | 0.579 | ∗∗∗ | 0.490 | ∗∗∗ |
CD68 | 0.406 | ∗∗∗ | 0.210 | 0.014 | |
IL10 | 0.397 | ∗∗∗ | 0.214 | 0.012 | |
Macrophage M1 | NOS2 | 0.185 | 0.022 | 0.266 | ∗ |
IRF5 | 0.232 | ∗ | −0.005 | 0.954 | |
PTGS2 | 0.421 | ∗∗∗ | 0.330 | ∗∗∗ | |
Macrophage M2 | CD163 | 0.639 | ∗∗∗ | 0.556 | ∗∗∗ |
VSIG4 | 0.470 | ∗∗∗ | 0.316 | ∗∗ | |
MS4A4A | 0.498 | ∗∗∗ | 0.380 | ∗∗∗ | |
Neutrophils | CEACAM8 | −0.049 | 0.549 | −0.086 | 0.315 |
ITGAM | 0.447 | ∗∗∗ | 0.279 | ∗∗ | |
CCR7 | 0.275 | ∗∗ | 0.149 | 0.081 | |
Natural killer cell | KIR2DL1 | −0.007 | 0.929 | −0.037 | 0.668 |
KIR2DL3 | −0.020 | 0.803 | −0.083 | 0.335 | |
KIR2DL4 | 0.140 | 0.083 | 0.072 | 0.401 | |
KIR3DL1 | 0.036 | 0.656 | 0.023 | 0.793 | |
KIR3DL2 | 0.115 | 0.158 | 0.115 | 0.180 | |
KIR3DL3 | 0.034 | 0.675 | −0.007 | 0.935 | |
KIR2DS4 | 0.174 | 0.032 | 0.136 | 0.112 | |
Dendritic cell | HLA-DPB1 | 0.316 | ∗∗∗ | 0.175 | 0.041 |
HLA-DQB1 | 0.241 | ∗ | 0.102 | 0.234 | |
HLA-DRA | 0.339 | ∗∗∗ | 0.167 | 0.051 | |
HLA-DPA1 | 0.223 | ∗ | 0.100 | 0.245 | |
Treg | STAT5B | −0.226 | ∗ | −0.132 | 0.124 |
TGFB1 | 0.411 | ∗∗∗ | 0.268 | ∗ |
∗ P < 0.01; ∗∗P < 0.001; ∗∗∗P < 0.0001.