Table 3.
Frequencies of common functional CYP2C19 alleles across countries/populations
Country | n | AF, % | ||
---|---|---|---|---|
*2 | *3 | *17 | ||
Europe | ||||
Croatia | 1119–1247 | 15.2 | N/A | 23.5 |
Czech Republic | 42–265 | 8 | N/A | 29 |
Denmark | 69–634 | 15.8 | 0 | 20.1 |
Estonia | 2407–44,448 | 13.5 | 0 | 26.4 |
Finland | 177–13,956 | 17.5 | 0 | 19.6 |
Germany | 60–1758 | 14.9 | 1.8 | 24.9 |
Greece | 283–327 | 14.1 | 0 | 18.2 |
Hungary | 112–591 | 13.3 | 0.9 | 23 |
Italy | 360–917 | 11.8 | 0 | 22.1 |
Netherlands | 428–1158 | 14.1 | 0.2 | 19 |
Norway | 83–403 | 15.3 | 0.3 | 22 |
Poland | 166–791 | 16.3 | N/A | 29.8 |
Portugal | 33–400 | 13.4 | 0 | 28.8 |
Russia | 290–1663 | 13.6 | 0.3 | 15 |
Slovakia | 26 | 19 | N/A | 33 |
Spain | 78–2328 | 14 | 0 | 17.1 |
Sweden | 110–2020 | 14 | 0.5 | 19.2 |
Turkey | 96–785 | 11.3 | 1.8 | 24 |
UK | 91–168 | 13.4 | N/A | 24.2 |
Americas | ||||
Brazil | 1034–1212 | 14.8 | 0 | 19.2 |
Columbia | 189–239 | 8.7 | 0 | 17.6 |
Costa Rica | 141 | 7.1 | 0 | 10.3 |
Cuba | 267 | 10.1 | 2.6 | 16.1 |
Mexico | 238 | 8.6 | 0 | 14.3 |
Nicaragua | 212 | 8.3 | N/A | 6.8 |
US | 3342 | 16.5 | 0.1 | 20.3 |
US–African American | 250 | 19.4 | 0.4 | 18.2 |
US–Asian | 250 | 27.6 | 4.8 | 6.2 |
US–Caucasian | 250 | 13.2 | 0.4 | 15.8 |
US–Hispanic | 250 | 12.8 | 0 | 15.2 |
US–Native | 50 | 11 | 0 | 9 |
Venezuela | 680 | 7.3 | 2.3 | N/A |
Africa | ||||
Egypt | 247 | 11 | 0.2 | N/A |
Ethiopia | 70–190 | 13.3 | 2.3 | 13.2 |
Ghana | 169 | 5.9 | 0 | N/A |
Morocco | 290 | 11.4 | 0 | N/A |
Tanzania | 251 | 17.9 | 0.6 | N/A |
Uganda | 99 | 12.6 | 1 | 17.2 |
Zimbabwe | 168 | 4.2 | N/A | N/A |
East Asia | ||||
China | 824–5679 | 29.1 | 4.4 | 1.2 |
Japan | 84–1194 | 30 | 11.3 | 1.1 |
South Korea | 271–648 | 28.3 | 8.6 | 1.5 |
South Asia | ||||
India | 206–600 | 35.2 | 2.4 | 19.2 |
Indonesia | 96–166 | 34 | 6.9 | 4.7 |
Thai | 1051 | 27 | 6 | 4 |
Vietnam | 100 | 20.5 | 2.5 | 1 |
Middle East | ||||
Iran | 82–200 | 12.9 | 0.7 | 21.6 |
Qatar | 108–976 | 11.6 | 0.3 | 20.4 |
Saudi Arabia | 97–201 | 11.2 | 0 | 25.7 |
Oceania | ||||
Australia | 5408 | 16.4 | 0.2 | 20.2 |
Australia aborigines | 239 | 35.5 | 14.3 | N/A |
New Zealand | 312 | 18.9 | N/A | > 17 |
Papua New Guinea | 172–401 | 45 | 16.9 | N/A |
The corresponding references are provided in Supplementary Table 2
AF allele frequency, n number of individuals genotyped, N/A not available