Table 3. Enriched TB-related pathways of macrophage subclusters by KEGG analysis.

Subclusters	2	3	6
TB: tuberculosis; KEGG: Kyoto Encyclopedia of Genes and Genomes.
Enriched genes of TB-related pathways	HLA-DMA, HLA-DMB, LAMP1, STAT1, ITGB2, CALM3, CD14, CTSD, ATP6V0D2, CTSS, HLA-DQA1	CIITA, CEBPB, TGFB1, ITGAM, STAT1, IFNGR2, ITGB2, CORO1A, HSPD1, FCGR3A, FCGR2A, MRC1, CD14, CALM1, FCGR2B, JAK1	FCER1G, STAT1, RIPK2, IFNGR2, IL18, TNF, CTSS, NFKB1, IL1A, IL1B, CD14, FCGR1A, CLEC4E, BID, HLA-DQA1, TLR2
Count	11	16	16
Gene ratio	0.063	0.052	0.072
False discovery rate	0.016	<0.001	<0.001
Adjusted P-value	0.017	<0.001	<0.001