TABLE 11.

Frequency of core haplotype and ancient wild-type core haplotype per line and effects on backfat.

Line	Haplotype	A1	Freq	b	SE	Logpval	${\sigma }_a^2$ Exp	${\sigma }_p^2$ Exp
Synthetic	GCAAG	A	0.7085	-0.29	0.02	45.92	0.029	0.016
	GCGAG	G	0.0636	0.30	0.03	19.12	0.009	0.005
Pietrain	GCAAG	A	0.6437	-0.26	0.02	40.08	0.054	0.027
	GCGAG	G	0.0841	0.20	0.03	8.71	0.011	0.006
Landrace	GCAAG	A	0.6298	-0.17	0.01	42.76	0.025	0.010
	GCGAG	G	0.0001	0.36	0.35	0.52	0.000	0.000
Large White	GCAAG	A	0.2002	-0.30	0.03	32.27	0.017	0.009
	GCGAG	G	0.0181	0.20	0.07	2.59	0.001	0.000