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. 2022 May 20;47(2):78–85. doi: 10.1584/jpestics.D22-007

Table 2. Binding energies and intermolecular forces in gabazine docking into LsRDLR homology models and the human α1β2γ2 GABAR cryo-EM structure.

GABAR Binding energy (kJ/mol) Hydrogen bond π–π Stacking
LsRDLR
WT −38.4 F166B, R71D, S136E Y69D
Y69DF −37.8 S165B, F166B, S136E F69D
F73DS −39.0 S165B, F166B, R71D Y69D
F106AY −36.3 S165B, F166B, R71D Y69D
Y69DF/F73DS −36.2 F166B, R126E F69D
Y69DF/F106AY −37.3 F166B, R71D, R126E, S136E F69D
F73DS/F106AY −41.5 F166B, R71D Y69D
Y69DF/F73DS/F106AY −40.2 S165B, F166B, T211C, S136E F69D
Human GABAR
α1β2γ2 GABAR cryo-EM −47.3 Y157βB, Y205βC, R67αD, R120αE Y157βB, F65αD

Superscript uppercase letters indicate loop names. Superscript Greek letters indicate subunit names.