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. 2022 Jun 9;5:440. doi: 10.1038/s42003-022-03398-6

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© The Author(s) 2022

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — a–c Principal component biplots of the shifts in the coral assemblages in 35 reef sites along the Mexican Caribbean between the pre- (blue) and post-outbreak (red) periods in (a) coral assemblages, (b) family assemblages, and (c) functional traits based on community weighted means (CWM). The points in (a–c) represent the reef sites for each period. Vectors represent the absolute contributions of families, species, and traits. The colored ellipses represent the 95% confidence intervals around the weighted average of the site scores for each period. d–f Box plots of the functional shifts between the pre- (blue) and post-outbreak (red) periods in the same reef sites with regard to (d) functional richness, (e) functional evenness, and (f) coral community calcification (Kg CaCO3 m² yr⁻¹). The points in (d–f) represent each surveyed reef site and box plots show the median (horizontal line), first and third quartiles (box height), and the minimum and maximum values (whiskers; excluding outliers). Species key in (b): Acer: Acropora cervicornis; AGAR_enc: Agaricia encrusting Apal: Acropora palmata; Aten: Agaricia tenuifolia; Cnat: Colpophyllia natans; Dcyl: Dendrogyra cylindrus; Dlab: Diploria labyrinthiformis; Dsto: Dichocoenia stokesii; Efas: Eusmilia fastigiata; Ffra: Favia fragum; Hcuc: Helioseris cucullata; ISOP: Isophyllia spp; MADR: Madracis spp; Mang: Mussa angulosa; Mcav: Montastraea cavernosa; MEAN: Meandrina spp; MYCE: Mycetophyllia spp; Oann: Orbicella annularis; Ofav: Orbicella faveolata; Ofra: Orbicella franksi; P_dig: Branching Porites; Past: Porites astreoides; Pcli: Pseudodiploria clivosa: Pstr: Pseudodiploria strigosa: SCOL: Scolymia spp; Sint: Stephanocoenia intersepta; Srad: Siderastrea radians; Ssid: Siderastrea siderea.