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. 2022 Jun 7;3(2):101436. doi: 10.1016/j.xpro.2022.101436
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains

T1 competent cells Shanghai Weidi Biotechnology Co, Ltd DL1015S

Chemicals, peptides, and recombinant proteins

Fetal bovine serum (FBS) Sigma, USA F2442
Pennicillin/Streptomycin solution Beyotime, China C0222
Trypsin-EDTA solution Sigma, USA T4049
Leukemia inhibitory factor (LIF) or ESGRO Millipore, USA ESG1107
T4 DNA ligase Takara, Japan 2011A
T4 polynucleotide kinase (PNK) (10 U/ μL) Takara, Japan 2021S
Bpil Thermo Scientific, USA FD1014
Gelatin Sinopharm Chemical Reagent (SCR), China 9000-70-8
Bacto-yeast extract Sangon, China A515245-0500
Bacto-tryptone Sangon, China A505247-0500
Agar Macklin, China A800730
Lipofectamine 2000 Invitrogen, USA 11668019
DMEM Invitrogen, USA C11995500CP
Non-essential amino acid (NEAA) solution (100×) HyClone, USA SH30238.01
Dithiothreitol (DTT) Fisher Biotec, USA BP172-25
Dimethyl sulfoxide (DMSO) Amethyst, China 966629
Carbenicillin YEASEN, China 60202ES08
β-mercaptoethanol Sigma, USA M3148
84 disinfection solution (with sodium hypochlorite) Aitefu, China 92651097
Sodium Chloride (NaCl) Sangon, China A501218-0001
PBS (20×) Sangon, China B548117-0500
Proteinase K Abcone, China P78893
Tris Beyotime Biotechnology, China ST761
SDS Sigma, USA L4390
Agarose Abcone, China A88490
GeneGreen nucleic acid dye TIANGEN, China RT210
EDTA Amethyst, China 976151-500G
EcoRV NEB, USA R0195S
HindIII NEB, USA R0104S

Critical commercial assays

T7E1 assay Vazyme, China EN303-01

Experimental models: Mouse wild-type ES cell lines

D1911 ES cell line (129/DBA hybrid background) Li Lab, ShanghaiTech (Lau et al., 2016)
D1906 ES cell line (129/DBA hybrid background) Li Lab, ShanghaiTech (Lau et al., 2016)
TC1 ES cell line (129 background) Leder Lab, Harvard (Deng et al., 1995)

Oligonucleotides

CACCGAATAGGAATTTGTGACGTCC GENEWIZ Zfp445-sgRNA1-top
AAACGGACGTCACAAATTCCTATTC GENEWIZ Zfp445-sgRNA1-bottom
CACCGAGCTCAGCGCAATCTTTATC GENEWIZ Zfp445-sgRNA2-top
AAACGATAAAGATTGCGCTGAGCT GENEWIZ Zfp445-sgRNA2-bottom
AGTGCGTCCTTCGTTACCTG GENEWIZ Zfp445-F1
GTGAAGGTAGCTGGGGATAC GENEWIZ Zfp445-R1
GAGGGCCTATTTCCCATGATTCCT GENEWIZ U6-Forward
GGACCTACAAGCAAGCAGAC GENEWIZ Zfp445-F2
GTCACCGAGCTGCAAGAACT GENEWIZ Puro-F
GCTCGTAGAAGGGGAGGTTG GENEWIZ Puro-R
GGAAACAGCTATGACCATG GENEWIZ M13 Reverse Primer

Recombinant DNA

pX330 Addgene, USA 42230
PGL3-U6-sgRNA-PGK-puromycin Youbio, China VT8203
pBluescript GenBank X52331.1

Other

AxyPrep DNA Gel Extraction Kit Axygen of Corning 35717KE1
AxyPrep Endo-Free Plasmid Midiprep Kit Axygen of Corning 09318KA2
Advantage GC2 PCR Kit Takara, Japan 639119
TA cloning with the pUCm-T vector Sangon, China B522213