Table 4.
Human males, snATACseq metrics
| snATACseq Rules | Donor 1 | Donor 2 | Donor 3 |
|---|---|---|---|
| Fraction of transposition events in peaks in cells | 7745 | 6741 | 5476 |
| Confidently mapped read pairs | 0.573 | 0.22 | 0.413 |
| Q30 bases in read 1 | 0.816 | 0.81 | 0.799 |
| Q30 bases in read 2 | 0.93 | 0.931 | 0.933 |
| Median high-quality fragments per cell | 0.92 | 0.928 | 0.928 |
| TSS enrichment score | 8718 | 5780 | 11032 |
| Nucleosome-free region (NFR) peak | 6.02 | 3.26 | 4.78 |
| Mononucleosome peak | TRUE | TRUE | TRUE |
| QC Result | GOOD | PASS | GOOD |
Presented in the table is the snATACseq QC metrics summary for the male human samples.