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Residue-wise stacking contact probabilities measured in simulations of the rod-like fibril in the absence (a) and in the presence of the SK9 segment (b). Corresponding data measured in simulations of the twister-like fibril are shown in (d) and (e). The differences in contact probability resulting from the presence of SK9 are shown in (c) and (f), respectively. Data are averaged over the final 50 ns of each trajectory.
