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. 2022 May 23;13:889791. doi: 10.3389/fmicb.2022.889791

TABLE 3.

Primary sequences and physicochemical properties of Library 3 peptides, which correspond to W-position III shown in Figures 1G–I.

Name Trp (W) Sequence Length (r) Chargea H μH
E20 3 VV RR WR RR WR RW 12 7 0.177 0.904
E18 3 WV RR WR RV VR RW RR 14 8 0.166 0.914
E15 3 VV RR WR RV VR RW RR RW 16 9 0.159 0.86
E12 3 WV RR WR RV VR RW RR VV RR 18 10 0.153 0.865
E9 3 RW VR RW RR VV RR WR RV VR RV 20 11 0.148 0.864
E6 3 RR WV RR WR RV VR RW RR VV RR VV 22 12 0.144 0.834
E3 3 RR VV RR WR RV VR RW VR VW RR VV RR 24 13 0.141 0.824
E22 4 RR WV RV WR RW WR 12 6 0.448 1.002
E34 4 RR WV RV WR RW VR RW 14 7 0.399 0.995
E33 4 RR WV RV WR RW WR RV 14 7 0.399 0.962
E37 4 RR WV RV WR RW VR VW RR 16 8 0.363 0.931
E40 4 RR WV RV WR RW VR RW RR VV 18 9 0.334 0.923
E43 4 RR WV RV WR RW VR VW RR VV RR 20 10 0.311 0.884
E46 4 RR WR RV VR RW VR VW RR WV RR VR 22 12 0.191 0.87
E47 4 RR WR RV VR RW VR VW RR VV RR WR 22 12 9.191 0.88
E50 4 RR WR RV VR RW VR VW RR VV RR WR RV 24 13 0.184 0.873
E87 5 RR WV RV WR RW WR RW 14 7 0.473 1.035
E92 5 RR WV RW WR RW VR VW RR 16 8 0.427 0.955
E96 5 RR WV RV WR RW VR RW RR VW 18 9 0.391 0.966

H (hydrophobicity) and μH (hydrophobic moment) were determined using the online peptide modeling software heliquest.ipmc.cnrs.fr/; peptides of the same length are minor positional variants of W; r, residues.

The sequences were modeled as idealized amphipathic helices based on helical wheel diagrams using the online modeling software Heliquest, which also provides the physicochemical properties listed in the table.

aAll charges are positive.