TABLE 3.
Characterization of cultivated thermophilic and heterotrophic bacteria isolated at the end of the hot-composting stage
ARDRA groupa | Representative strain | Size of sequence (bp) | GenBank accession no. | Closest identified relativeb (% sequence similarity) |
---|---|---|---|---|
1 | Sko08 | 640 | AF213284 | Bacillus coagulans (98.9) |
2 | Sko02 | 559 | AF213281 | Bacillus denitrificans (99.8) |
3 | Sko06 | 638 | AF213282 | Bacillus smithii (99.8) |
4 | Sko14 | 606 | AF213285 | Pseudomonas citronellolis (95.7) |
5 | Sko17 | 693 | AF213286 | Pseudomonas stutzeri (95.4) |
6 | Sko07 | 637 | AF213283 | Xanthomonas campestris (96.0) |
Characterized by combined results of RsaI and CfoI digests of PCR-amplified 16S rRNA gene sequences.
Identified by BLASTN 2.0.8 (1).