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. 2022 Jun 13;13:3394. doi: 10.1038/s41467-022-31154-1

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© The Author(s) 2022

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 6 — a–c Pseudotemporal cell ordering along trajectories of APCs in iBAT. Pseudotime is depicted from dark to light blue (a). Cells were classified into 3 states (b). Group identities were overlaid on pseudotime trajectory map (c). d Stacked bar chart showing the abundance of cells from distinct groups in 3 states or from distinct states in 5 groups. e Heatmap of DEGs between different states. Top 10 DEGs and their scaled expression are shown. f Feature plots of expression distribution for group markers across pseudotime. Source data are provided as a Source Data file.